LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g01346	ATGGCTGCAGAATCGTACGATGAAACTATCGCATCGCTGACCAAACTTCTCCAGGAGAAAGCTGAGCTAGGCAGCATCGCCGCCATTAAGATCAGGGAGCTCACGGCGGAGTTAGAGGCCACCGCTGCTAAACCGTTTAACCCGGATGACAGGATCCGATCCGGCTTCATCCAATTCAAAACTGAGAAATTCGAGAAAAATCCTGATCTGTACGGTGAACTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTGTTTGCTTGCTCAGATTCAAGAGTTTGTCCCTCCCACATTTTGGATTTCCAACCAGGTGAAGCTTTTGTGGTCAGAAACATTGCCAACATGGTTCCACCATATGACAAGACCAAGTATTCGGGAGCAGGGGCGGCCATTGAATATGCTGTGTTACATTTAAAGGTGGAGAATATTGTAGTAATTGGACACAGCTGCTGTGGAGGTATCAAGGGCCTCATGTCTATCCCAGATGATGGGACCACCGCAAGTGATTTCATAGAAAATTGGGTTCAAATATGTAATCCAGCAAGGTCCAAGACTAAAACAGATAGCAGCTTAAGCTTCGCTGAGCAGTGTACAAACTGTGAAAAGGAAGCTGTGAATGTATCTCTTGGGAATTTATTGACTTATTCATTTGTGAGAGAAGCTGTTTTGAAGAAAACCCTTGCTTTGAAAGGAGCACATTACAATTTTGTTAATGGCACTTTTGAGCTTTGGGATTTGAACTACAATGTTTTGCCCTCTGTGGCCATTTAA	768	0.444	MAAESYDETIASLTKLLQEKAELGSIAAIKIRELTAELEATAAKPFNPDDRIRSGFIQFKTEKFEKNPDLYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIENWVQICNPARSKTKTDSSLSFAEQCTNCEKEAVNVSLGNLLTYSFVREAVLKKTLALKGAHYNFVNGTFELWDLNYNVLPSVAI	255

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g01346	255	Gene3D	Carbonic anhydrase	40	255	IPR036874	GO:0004089\|GO:0008270
	Vivi2g01346	255	FunFam	Carbonic anhydrase	37	255	-	-
	Vivi2g01346	255	CDD	beta_CA_cladeB	55	243	IPR045066	GO:0004089\|GO:0008270
	Vivi2g01346	255	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	87	94	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Vivi2g01346	255	Pfam	Carbonic anhydrase	83	239	IPR001765	GO:0004089\|GO:0008270
	Vivi2g01346	255	SUPERFAMILY	beta-carbonic anhydrase, cab	40	251	IPR036874	GO:0004089\|GO:0008270
	Vivi2g01346	255	SMART	Pro_CA_2	75	244	IPR001765	GO:0004089\|GO:0008270
	Vivi2g01346	255	PANTHER	CARBONIC ANHYDRASE	40	247	IPR001765	GO:0004089\|GO:0008270
	Vivi2g01346	255	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	131	151	IPR015892	GO:0004089\|GO:0008270\|GO:0015976

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g01346	Vivi-Chr2	57394146	57397696	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g01346	K01673		-	gmx:100803945	438.343

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi2g01346	2	57394146	57397696	Vivi2g01346	2	57394146	57397696	ECH