Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01314 ATGCAAGAGTTAGATCAATGGAAGGAACAGATTTCTCACCTCTTGAATGTCGCAAATGATTACATTCGTGAAATTCCAAGTGATCAACTCTATGCCGCTGCTGCTATCGCGGTTTTCACAACCCTAATTCTTCTCCTGCTTCGGTTTTTCAAGCGCAGCAAGGCTAACACCATTGTGTTGACCGGACTTAGTGGGAGTGGGAAAACTGTTATCTTCTATCAGCTTAAGGATGGGTCTACTCATCAAGGTACTGTTACGTCGATGGAACCGAATGAAGACACTTTTATTCTTCATAGTGAAACAACGAAGAAGGGAAAGATAAAACCGGTTCATATTGTTGATGTTCCCGGACATTCTCGTCTTCGACCCAAATTGGATGAGTACTTGCCTCAAGCAGCTGGCACCGTCTTTGTTGTTGATGCTTTGGACTTCTTACCGAATTGCCGTGCTGCCTCAGAGTACCTATATGATCTGTTGACTAAGGGAAGTGTTGTGAGGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACCGACAAAGTCACTGCTCACACCAAAGAATTTATCTGCAGACAACTCGAAAAAGAAATCGACAAATTACGGGCATCAAGAAGTGCAGTTTCAGATGCTGACGTTACAAATGAGTTTACTCTGGGGGTGCCTGGTGAGCCATTCTCGTTTAAACAGTGCTCTAACACAGTTACAACTGCAGATGCTTCTGGTTTAACTGGAGAGATATCTCAGCTAGAAGAGTTTATCAGACAACATGTGAAGCCATAG 780 0.4321 MQELDQWKEQISHLLNVANDYIREIPSDQLYAAAAIAVFTTLILLLLRFFKRSKANTIVLTGLSGSGKTVIFYQLKDGSTHQGTVTSMEPNEDTFILHSETTKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGTVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHTKEFICRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEPFSFKQCSNTVTTADASGLTGEISQLEEFIRQHVKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01314 259 Gene3D - 50 257 IPR027417 -
Vivi2g01314 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Vivi2g01314 259 Coils Coil 190 210 - -
Vivi2g01314 259 CDD SR_beta 56 255 IPR019009 -
Vivi2g01314 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Vivi2g01314 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
Vivi2g01314 259 Coils Coil 4 24 - -
Vivi2g01314 259 PANTHER TRANSFERRIN 25 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01314 Vivi-Chr2 56426933 56429766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g01314 1 259 Miscellaneous Gene Families AT5G05670 67.308 8.49e-129 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01314 K12272 - gmx:100800572 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01314 2 56426933 56429766 Vivi2g01314 2 56426933 56429766 ECH