Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01264 ATGAAAAACATGCGTAGTCCAGTCAGAGGAATAAAAACTCATATTCCATTTCCAACTCGGATTCTACCTGACTCAGCGCTCACTCAGTTGACTCGTCCCCTCACCAAAATCCCAAAACCCTTCCCGGCGAACATGTCGTCACCGGAGGGAAAACGGTTAGAAGAAGAGTTATCCTACCCAATTCTCGTCGCGGAACGAGTTCGCTCAGCGATTGAAGAAACCGACTCGTTCAAACTCGAGTGCTCCGAAGTCTGGAAACAAGTCGAACGCCTCCTCCAAATGCTCCGAACGGTTGTCCGAATCGCCGCCACCTCGCCGCTTTACGAGCGTCCCGTCCGTCGAGTAACGGCTGACACGGCGAAGAATCTAGAACGCGCTTTGACTTTGGTCAGAAAGTGTAAGCGTCGTAGCATCCTCCACCGTGTCGTTACCATCGTCGGTGTCGCCGATTTTCGGAAGGTTCTAAGCCACCTCGACGCCTCCGTCGGAGATATGAAGTGGCTTTTGAGCATCCTCGACGGCGAAGGTGGAGTAAATTTGGCACTTCCTCCGATTGCGAGTAATGATCCTATTCTTTCTTGGGTATGGTCTTTTATTGCTTCGATTCAAATGGGTCAATTGAATGATAAAATCGAAGCGGCGAATGAACTCGCTTCATTAGCACAAGATAATGATAGGTATCAAAAGATTATTGTTGAGGAACAAGGTGTTCCTCCTCTTTTGAAGCTTCTTAAGGAAGCTGCTTCACCTGCTGCTCAAATTGCAGCTGCAACTTGTTTGTGTCATTTGGCTAATGATTTGGAGAGGGTTAGGGTTATTGTGAATGAAGTTGGAGTTCCTGCTGTTGTTCAGGTTCTTGCTGATTCGCCGATTAGGGTTCAAACCCTAGCTTCTAATTTAGTTGCTAGGATGGCTCGACATGATCCTGTTGCTCAGGAGGATTTCGCGAGGGAGAACGCGATTAGGCCGCTTGTTACGCTTTTATCGATGGATACTACTGTGGATGAGCAGCCGGGTAATAATGGTAGGCAGAGTATTCATTCTATTTTTCAGATTAATAAGGAGTTAGGGAAGAAGACTGATTATATGTCTGGTAATGGTAATAGTAGTAGTAGACAGTTTGCGAATTCGTATTCCAATTCCTATTATTTTAGCGAGGGGAGTGGCCGTGGAGGGAATCATAGGAAGGAGAGGGAAAATGTGGATCCTGTTGTGAAGCTTCAGCTTAAAATTAGCTGTGCCGAGGCTTTGTGGATGCTTGCGGCGGGGAGTGTGTCGAATAGTAGGAAGATAACGGAGACGAAAGGGATGCTTTGTTTGGCTAAGATTATCGAGAAGGAACAGGGAGAGTTGCAGCAGAATTGTTTGATGACTATAATGGAGATAACAGCTGCGGCTGAGTCCAATGCTGACCTTCGACGTGCTGCGTTTAAGACCAACTCACCTCCTGCTAAAGCTGTTGTGGAACAGCTCTTAAGGATAATTAAAGAGGTTGACAGTCCATCAATGCAAATTCCGGCGATAAAGTCTATTGGTTCGTTGGCTAGAACGTTTCCTGCTAGAGAGACTCGAGTAATTGAACCCCTTGTAGCACAGCTGAGTAATAGAGACATGAATGTAGCAGATGAAGCAGCCATTGCTCTTACCAAGTTTGCTTGTCCAGATAATTTCTTATATATTGAGCATTCTAAGAAAATAATCGAATTCAATGCAGTCCCAGCAGTGATGAAGCTCCTGAGGAATAACGATGTTAACCAGATGTATCATGGTCTAACTCTCCTTTGCTACCTTGCACTACATGCTGGGAGTAGTGAGTCCTTGGAACAAGCAAGGGTGTTGTTGGCTCTAGAGGGTGCAGATAAAACAATTCTTCCTCAGCATATAAGGGATTTGGTATCCAAAGCAATTGTACACCTCAATTTGTATCATGCTGGAAGGAATTCTCAACCATTGTCATATATGCCTTGA 1968 0.4548 MKNMRSPVRGIKTHIPFPTRILPDSALTQLTRPLTKIPKPFPANMSSPEGKRLEEELSYPILVAERVRSAIEETDSFKLECSEVWKQVERLLQMLRTVVRIAATSPLYERPVRRVTADTAKNLERALTLVRKCKRRSILHRVVTIVGVADFRKVLSHLDASVGDMKWLLSILDGEGGVNLALPPIASNDPILSWVWSFIASIQMGQLNDKIEAANELASLAQDNDRYQKIIVEEQGVPPLLKLLKEAASPAAQIAAATCLCHLANDLERVRVIVNEVGVPAVVQVLADSPIRVQTLASNLVARMARHDPVAQEDFARENAIRPLVTLLSMDTTVDEQPGNNGRQSIHSIFQINKELGKKTDYMSGNGNSSSRQFANSYSNSYYFSEGSGRGGNHRKERENVDPVVKLQLKISCAEALWMLAAGSVSNSRKITETKGMLCLAKIIEKEQGELQQNCLMTIMEITAAAESNADLRRAAFKTNSPPAKAVVEQLLRIIKEVDSPSMQIPAIKSIGSLARTFPARETRVIEPLVAQLSNRDMNVADEAAIALTKFACPDNFLYIEHSKKIIEFNAVPAVMKLLRNNDVNQMYHGLTLLCYLALHAGSSESLEQARVLLALEGADKTILPQHIRDLVSKAIVHLNLYHAGRNSQPLSYMP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01264 655 Pfam Armadillo/beta-catenin-like repeat 225 264 IPR000225 GO:0005515
Vivi2g01264 655 SUPERFAMILY ARM repeat 207 612 IPR016024 -
Vivi2g01264 655 Gene3D - 201 364 IPR011989 -
Vivi2g01264 655 Coils Coil 204 224 - -
Vivi2g01264 655 PANTHER ARMADILLO REPEAT ONLY 4 53 643 - -
Vivi2g01264 655 SMART arm_5 513 553 IPR000225 GO:0005515
Vivi2g01264 655 SMART arm_5 266 306 IPR000225 GO:0005515
Vivi2g01264 655 SMART arm_5 223 265 IPR000225 GO:0005515
Vivi2g01264 655 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 235 278 IPR000225 GO:0005515
Vivi2g01264 655 Gene3D - 55 171 IPR036537 GO:0007166
Vivi2g01264 655 Gene3D - 476 625 IPR011989 -
Vivi2g01264 655 Gene3D - 404 475 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01264 Vivi-Chr2 53697541 53700007 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01264 - - vvo:131650646 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01264 2 53697541 53700007 Vivi2g01264 2 53697541 53700007 ECH