Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g01201 ATGGCATCATGGTCCACTGGCTTTTGTGGCTGCTTTTCTGACTGTAGCTCTTGTTGCCTCACTTTATGGTGTCCATGTGTTGCATTCGGAAGGGTAGCTGAGATTGTAGACAAAGGAACAACTTCTTCTTGTGTGCATGGATTGCTTTACTGTCTACTTGGTGGTTTTAGTCATTTTGGGTCAATCTATGCATGCATTTATCGCACAAAATTAAGGAGGGTTTTTGGAATTCATGGAAGCCAAACTTGCGATTGCATTGCTAGTTGTTGTTGTGTTCATATTTCTCTGTGTCAAGAGCATCGCGAGCTTGAAGCTCGTGGTTTCAACGTGTCTGCAGGTTGGAAAGGGAACGTGCAAATGGGTTCCCGCGGTGTCACGGCGGCTCCGGCATTGCAAGGTGGCATGAGTCGTTAG 414 0.4638 MASWSTGFCGCFSDCSSCCLTLWCPCVAFGRVAEIVDKGTTSSCVHGLLYCLLGGFSHFGSIYACIYRTKLRRVFGIHGSQTCDCIASCCCVHISLCQEHRELEARGFNVSAGWKGNVQMGSRGVTAAPALQGGMSR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g01201 137 NCBIfam uncharacterized Cys-rich domain 3 104 IPR006461 -
Vivi2g01201 137 Pfam PLAC8 family 4 102 IPR006461 -
Vivi2g01201 137 PANTHER DUF614 FAMILY PROTEIN-RELATED 3 111 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g01201 Vivi-Chr2 50611107 50612076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g01201 - - ccaj:109809364 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g01201 2 50611107 50612076 Vivi2g01201 2 50611107 50612076 ECH