Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08524 ATGAACACATTCGATACAGAGAAAGTAGCACCGATATCAAACCAAAACGAAAAAGTAGAAGAAGAAGAAGACGAAGATGAGCTATCTCCCATCGAAGAAGTCCGTCTCACCGTAACAAACACCGACGACCATACTCAACCGGTATGGACCTTCCGCATGTGGTTTCTCGGTCTCATTTCATGCTCAATCCTCTCCTTCCTCAACCAATTCTTCGCGTACCGAACGGAGCCTCTCATCATCACTCTCATCTCCGTTCAGGTCGCGACGCTTCCGATCGGGCACTTCATGGCGGCGGTTCTGCCGTCGACGAAGTTTACTCTCCCCGGGTTCGGGTCGAAAATGGTGTCGTTTAACCCGGGTCCGTTTAACATGAAGGAGCATGTGTTGATTACTATATTTGCAAATGCGGGAAGCGCGTTCGGATCCGGGTCGCCTTATGCGGTTGGGATTGTGAATATTATTAAAGCGTTTTATGGAAGGAGTATTTCTTTTCATGCTGCTTGGCTTCTCATTATTACTACTCAGGTTCTAGGATATGGATGGGCTGGGTTGCTGAGGAAGTATGTGGTGGAGCCAGCCCACATGTGGTGGCCCAGCACCCTTGTCCAGGTCTCACTTTTCCGAGCTTTGCATGAGAAAGATAACGACCACCGAATGCCACGGGCAAAGTTTTTCTGTATTGCACTAGTATGCAGTTTTTCATGGTATGTGATCCCAGGATACTTGTTCACAACACTCACAAGCATATCATGGGTCTGTTGGGTATTCTCCAAGTCAGTCACAGCTCAGCAAATAGGCTCAGGCATGAAAGGTCTTGGAGTTGGAGCCATTACACTTGATTGGTCTGCTGTGGCATCATTCTTGTTCAGCCCTCTTATCTCACCATTCTTTGCCATTGTCAATGTTTTTATGGGCTATGCACTAATAGTCTATACCGTGATTCCCATTGCGTATTGGGTCCTAGATGTTTACAATGCTAAAAGGTTTCCAATTTTCTCCTCTCACCTTTTCACTGCTGAAGGTCAAAAATACAACATATCTGCTATTGTCAATGACAAGTTTGAGCTAGATGAGGCAAAGTATAGAGAGCAAGGTAGAATTCATCTAAGTGTGTTTTTCGCTCTCACTTATGGCTTTGGATTTGCAACCATAGCATCCACCCTTTCGCATGTTGCTTGCTTCTATGGAAGGGAAATTATGGAGCGGTATCGTGCTTCTTCAAAGGGTAAAGAAGATATCCACACAAGATTGATGAAAAGATACAAAGACATACCTTCTTGGTGGTTTTACGCGTTGTTGGCTGTGACTCTTGCTGTTTCTCTCGTGCTATGCATCTTTCTCAATGACCAAATTCAGATGCCTTGGTGGGGACTTCTCTTTGCCGCATCTTTAGCTTTTGTGTTTACTCTCCCTATTAGCATCATAACTGCCACCACAAACCAGACACCTGGATTGAATATCATCACCGAGTATGTCTTCGGTTTGATTTACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTACGGTTACATAAGCATGGCACAAGCAGTCTCCTTCCTTAGTGATTTCAAGCTTGGACACTACATGAAAATCCCTCCAAGATCCATGTTCTTAGTTCAGTTCATAGGAACAATGCTTGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTAAACTCTATCGAGAATATATGTCATGATGATCTCCTTCCAGAAGGTAGTCCTTGGACATGCCCAGGTGACCGTGTTTTCTTCGATGCTTCGGTTATTTGGGGTCTGGTAGGACCAAAAAGGATATTTGGTTCACAAGGAAACTACAGTGTAATGAATTGGTTTTTCCTCGGAGGTGCAGTAGGACCGATAATTGTTTGGCTATTTCATAAAGCCTTTCCTAAACAATCATGGATTCCTTTGATTAACCTTCCAGTTCTCCTCGGAGCTACAGGAATGATGCCACCAGCAACACCATTGAACTACAATGCTTGGATTTTCTTTGGAACGGTTTTCAACTTCTTTGTGTTCCGTTACCGAAAAAGTTGGTGGCAGAGATACAACTATGTTCTATCAGCAGCACTTGACACCGGAGTAGCTTTTATGACTGTTCTGCTTTACTTTTCACTGAGTTTGGAAAATAGAAGTATTACGTGGTGGGGAACTGACGGTGAACATTGTCCATTGGCATCTTGTCCGACTGCAAAAGGCATATCGGTTCCTGGTTGCCCAACAAACTTGTGA 2244 0.4434 MNTFDTEKVAPISNQNEKVEEEEDEDELSPIEEVRLTVTNTDDHTQPVWTFRMWFLGLISCSILSFLNQFFAYRTEPLIITLISVQVATLPIGHFMAAVLPSTKFTLPGFGSKMVSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFHAAWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDNDHRMPRAKFFCIALVCSFSWYVIPGYLFTTLTSISWVCWVFSKSVTAQQIGSGMKGLGVGAITLDWSAVASFLFSPLISPFFAIVNVFMGYALIVYTVIPIAYWVLDVYNAKRFPIFSSHLFTAEGQKYNISAIVNDKFELDEAKYREQGRIHLSVFFALTYGFGFATIASTLSHVACFYGREIMERYRASSKGKEDIHTRLMKRYKDIPSWWFYALLAVTLAVSLVLCIFLNDQIQMPWWGLLFAASLAFVFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIENICHDDLLPEGSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYSVMNWFFLGGAVGPIIVWLFHKAFPKQSWIPLINLPVLLGATGMMPPATPLNYNAWIFFGTVFNFFVFRYRKSWWQRYNYVLSAALDTGVAFMTVLLYFSLSLENRSITWWGTDGEHCPLASCPTAKGISVPGCPTNL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08524 747 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1g08524 747 NCBIfam OPT family oligopeptide transporter 32 711 IPR004813 GO:0035673
Vivi1g08524 747 NCBIfam small oligopeptide transporter, OPT family 28 714 IPR004648 GO:0055085
Vivi1g08524 747 PANTHER ISP4 LIKE PROTEIN 18 744 IPR004648 GO:0055085
Vivi1g08524 747 Pfam OPT oligopeptide transporter protein 49 709 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08524 Vivi-Chr1 243897626 243903160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08524 20 746 Organic Solute Cotransporters AT5G64410 81.293 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08524 - - ahf:112714781 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08524 1 243897626 243903160 Vivi1g08524 1 243897626 243903160 ECH