Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08523 ATGGAACTAGTTAGGCGTAGAGTAATGGATAATGGGGGAGATGAGGAGATGGATGTTGAAACGCCTGTATCGGAGCAACGATTCTATCCTTCGCATCCGGGTTTGGTGAAGAAGAGAGCTTATATATTTGATGGTTTGGGGAATTTTTATAATAAGGAATGGGATTTGGCTGACTTTAATCAGAAAGAAGAAAAGGAGTTGGGTATGGAGGAAGGACGGGGGAATGAGTTTTCTTGGTACCATGTGGAGCTTCCGAAAGGGAATCAGAAGTTGGCGCAATCTGCGCAGGATTTGATTGGTGTATTATGTCCGCCGTTGAAGCTACAAGATATTCTTTCGCTTATTAGCAATGGACCGTTTTGTGCACATGTGGATGGTGCGCTTGTGTTTCGGGTTAACTCACCCGGTCCTCCTTCTAGTGATTTTACTTTCAGGCTTGCTGCTAGAGTTACCGAGAATTCGGTGATTACAGTTTCGTTAGGGCGTGTACCTCGGCTGGGTTTCTCGCGTATGGGGGAATCTTTACTTTCGGAAGTCCCTAGCGTTGAAGGCTCCCCTCAGTTTAATGGTCGGCAGAAGGAAGGAAGTGGGCCGGTGATTAAGGAGCATGTTCTTGAATTCTTGTTGACTATGAATCATTCTGAGGAAGCGGACAATCCTGTTCCTAAATCTGTCTCGAATCTTGTCGTGCACATAGTAGATACACACGTTGATCAGCTTCAAGATCTCGTGACAAAGCTTGAGATGGAGTTGGACTCCGTGGAGCTTGATCTCGATAAAGGTGGTTATGCTCTGAAGAAACAAATGCTAGATGATAGAAGATTCCCTAAACTGCATATTAATTTGCAGCGGCTCCTGCAGGTGATTGCGCACGGAGAACAAGTGTATCTTCGTGTAAAAGAAAAATCGTCTTCGAAAAGATGGTTTGCGAGCGAAGACATTAACTCACTTGAAGAACTAATTGGAAGGTTGAGAAGGCTAAAGGAGAATTTAGGGTTTATAGTTAATCGTGTCACGGCAATACAGGCTGGTCTTGACAGCTGGCAGTCGGAGCAAATAAACCGTAAACTCTACTATCTCTCGTTCCTATCGATAATATTCCTCCCGCTGTCCATCATAACAGGAGTTTTTGGCATGAACGTTGGAGGAGTTCCGTGGACAGGTCAAAATGCGCCGGAGCTAAAGGATGGTTTCCGCAACGTCATGCTAGTCTGTGTCGCTATGCTTGTTCTTGTACTACTTTGCTTCATTTTCCCGGCTCTTTATATGCGTATAGCTGCTGTTTGGCGTGAAAAGAGAACTCTTGGAAGAAATTGGTCGCTTAACAGGAAGTCATTGTTGAGGAGACCGTTAAGAATAGAAGATGCGGCGAGAGGGGGTTACCTTCGGATTTAA 1395 0.4495 MELVRRRVMDNGGDEEMDVETPVSEQRFYPSHPGLVKKRAYIFDGLGNFYNKEWDLADFNQKEEKELGMEEGRGNEFSWYHVELPKGNQKLAQSAQDLIGVLCPPLKLQDILSLISNGPFCAHVDGALVFRVNSPGPPSSDFTFRLAARVTENSVITVSLGRVPRLGFSRMGESLLSEVPSVEGSPQFNGRQKEGSGPVIKEHVLEFLLTMNHSEEADNPVPKSVSNLVVHIVDTHVDQLQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVIAHGEQVYLRVKEKSSSKRWFASEDINSLEELIGRLRRLKENLGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNAPELKDGFRNVMLVCVAMLVLVLLCFIFPALYMRIAAVWREKRTLGRNWSLNRKSLLRRPLRIEDAARGGYLRI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08523 464 SUPERFAMILY CorA soluble domain-like 72 343 IPR045861 -
Vivi1g08523 464 Gene3D Magnesium transport protein CorA, transmembrane region 349 422 - -
Vivi1g08523 464 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 352 417 IPR045863 -
Vivi1g08523 464 PANTHER OS08G0130000 PROTEIN 15 464 - -
Vivi1g08523 464 Pfam CorA-like Mg2+ transporter protein 217 417 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vivi1g08523 464 Gene3D Magnesium transport protein CorA, transmembrane region 222 348 - -
Vivi1g08523 464 Coils Coil 310 337 - -
Vivi1g08523 464 Coils Coil 237 257 - -
Vivi1g08523 464 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08523 - - psat:127083848 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08523 1 243818069 243821247 Vivi1g08523 1 243818069 243821247 ECH