Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08374 ATGGCATCATCAAGTTCAAAGAAGAATGGTGGGTCGGTTGTGTTTGAGGATTTCTTCCCTTCAATGATGGAGAAGCTAGGAAGTGAAGGGTTTATGAAAGAGTTGGCAAATGGGTTCAATGTGTTGATGGATAGAGAGAAGAAAGTGATAACATTTGAGAGCTTGAAGAAGAACTCGGCATTGCTTGGGCTCGAAGGTATGAGTGATGATGAGATTACTTGCATGTTAAGAGAAGGTGATATGGATGGAGATGGAGCTCTTAGTGAAATGGAGTTTTGTACTCTCATGTTTAGGTTGAGTCCTTCTTTGATGAATGACACTAAGCAACTTTTGGGGGAAGTCATTTTCAATGGAAATTAA 360 0.4 MASSSSKKNGGSVVFEDFFPSMMEKLGSEGFMKELANGFNVLMDREKKVITFESLKKNSALLGLEGMSDDEITCMLREGDMDGDGALSEMEFCTLMFRLSPSLMNDTKQLLGEVIFNGN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08374 119 PANTHER CALCIUM-BINDING PROTEIN KIC 13 114 IPR044205 GO:0005509
Vivi1g08374 119 SUPERFAMILY EF-hand 7 96 IPR011992 -
Vivi1g08374 119 ProSitePatterns EF-hand calcium-binding domain. 80 92 IPR018247 -
Vivi1g08374 119 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Vivi1g08374 119 Pfam EF-hand domain pair 46 98 IPR002048 GO:0005509
Vivi1g08374 119 Gene3D - 13 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08374 Vivi-Chr1 239395150 239395686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g08374 15 115 EF-hand Containing Proteins AT4G27280 58.824 1.20e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08374 K24345 - gmx:100306210 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08374 1 239395150 239395686 Vivi1g08374 1 239395150 239395686 ECH