Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08174 ATGGACATTTCCGTCATTTCCTTTTTCACATTCATCTTCTTCTTCTCCGTCGTAACTTCCAACCCTTCCGATTCATCTTTCACAACCACCTACCACCGTCTCTGCAATGACATCGTCCCCGTCTCCGCCACGTCGCCGCCGTCCGATTCTCCAACCTCCCCCGCCATCGCCGACTCTCTCTCCCTCCAGTCCGCTTACTTCTCCGGCGGCGATCCACTCTTCAACCGATCCCCCGACTCAAGCTTCTACAAACACGTCGCCTTCCACGTCAACTCCGCCCGGAGAATCCCATCCGACGGTACAATCGACGGCCTGTACGAATTGCTAGGGCAAATGAATCTCCAGCAACGAGCAAGAAGAGTCCGGTCCAGTCCGGCGAGGGTTTATCACGGACCTAGGGTTCCGCTGAGGATGCGTGTTTCTTCTCTGAAAGGCTATTGGTCGGAATCTTCTGGTAAGCTTTGTATGTTTGGAAGAGGCTTTTATAGTAATACAAACAATCTGAGAGATGTTAGTGTTAGTGTTGTTATTAAGCTTCGTTACCCGAATCGCGTTACGCTTTTGGATAGTTTGATTACTGGAAGTGTTGAAAGCTTTGATGAAATCAATAGCTTGCATTATTTTGAACCTGTTTCGATGTTGACTATATCTCGGAGTTCGAATTATTATTTTACAATGGGTGGGAACAATATTGATAGTAATGGATGTGTAGCGGGATCTGGATCGAATGAGGAGGAGAGTTTGAACCTTGGGAATGTGAAACAAGGGGTCTGTTATGGGTTTCTCGATCATGTGGATAGCTTTCGTGTTGAATATGGGAGTCATTGTAATAATGTGAGTTGCAATCTCTTTGGTGGTGGTTCTGGTGTTGAAAAGTTGCTTGGTTTCATGGGTTTGTACAGAACTCGGTGCGTGGAGGGTGGGAAGATTCAGATGCTGTTGGATTTTCATGAATCGGAGTATACTGACTGGTTTTTACTGGCTCATCCGAATACGACGTTGATATCTGAGGGGGTGTGGGACGAGAATGAGAATCGGCTTTGTGCAGTTGCGTGCCGGATTTTGAACATCACGGGAACTCCTTACGTTGGAGATTGCTCGATTAAGCTTACGTTAAGGTTTCCTGCTGTGTTGTCTTTAAGAAATAGGAGTACTATTTTGGGCAAGATATGGAGTGATAAACCTGTTGGTGAATCTGGCTACTTCGGCAGCGTGGGATTTGAACGTATCTCGAAGAGATCGGTAAGTTTGCCGGGTGGTTTACAGTACAAGTATACTGAAATTGGCAGAGTAAGAAAGTCTTGTGCCGAAAAGATGACTGCTAGAGGAAAGGGAAAGAACTATCCAGATGTATATTCTTCTGATACAGCATTTAGCATGGTTGTGACAAACAGCGAAGGGCAAGTAACTCAAGGTTACTCGTTACCATTGTTTGTTGGTGATCAAGGTTATGAAGGACGGCCTTATGGGGTTCCATTTCTTCCGACGAATGGTGGAAACTTGAAAGCACACAGTTTGCAATTCAGCAATTCGTTGAATGTCAGCTATGCGTTTTTCCTTAACCCTTCTTCTGATTTTAAGTTTGGTAATGAGATCTCATCAACAGAAATGAAAATTAGTGCTGAAGGATTGTACAACAGGAAAACTGGAGTAATGTGTCTGATAGGGTGTCGGCGTTTGAGAACAAATGACAAATTACTGACGAAGAATGAGTCTCTGGACTGTGAAATCATGATTAATATCCAGTTTCCTCCATTGAATGCAAAAGGAGGTCAACCTGTTGAAGGGACTATAGCAAGCATGCGACAAAAGACGGATTCTTACTATTTTGAACCCCTTCAGTTGTCTTCATATTCTATGAGCAAACGAGAAGCAGACGCGTCCATTTGGAGAATGGACCTTGAAATCGTTATGGTAATGATATCAAACACACTCGCTTGTGTGTTTGTAGGATTGCAACTCCTCCATGTGAAAAAGCACGCAGAAGCGCTTCCTCGCATTTCCATTGTGATGCTTCTATTCATTACTCTAGGTCACATGATTCCCCTGATGCTGAATTTTGAAGCCTTATTCAAGGTGAATCATAACAGCGTGCAAGACACTTTTCTCGGGAGTGGAGGCTGGCTTCAAGTGAAGGAAGTAGTTGTGAGAATGGTGACAATGGTAGCTTTCCTTCTAGAATTGCGTCTCCTACAATTGACCTGGTCTTCAAGACAGACCGAAGAAAGCCAATCACAGCCAGGTTTATGGGTTTCTGAAAAATGGGTTCTATTCATTATTCTACCATTGTATTTTACCGGTGGATTAACTGCATGGTTCGTGCACATATGGAAGAATCATCGCCAGAAAAGCTCTCGACCGTTCCGTCTTTCACGCCATAAGTTTAAAACTCCTCGTAAACATATTAATCAACTTCCATCACTCTGGGAAGACATGAAATCTTACGCTGGTTTACTCCTAGACGGGTTTCTGCTCCCACAAATTCTGTTCAACATATTGTCGAACTCAGAAGAAAAACCTTTGGCATCTTTGTTTTATTTCGGAACCACCATTGTTCGAATACTGCCCCATGCGTATGATCTTTATAGAGCTCACAGTTATGCATGGCACCTTGGTATATCATACATATACGCAGACCATAGTAGGGATTTTTATTCAACAGCTTGGGACATTGGAATTCTGATTGGTGCTCTTTTATTTGCTTTAGTTGTATACTTTCAGCAAAGATTTGGCAGCCGATGTTTTCTTCCAAAGAGGTTCAGGGGAACTTCTGCATATGAGAAAGTACCTGTTATTGGTAATGATGATTTGTGA 2814 0.4346 MDISVISFFTFIFFFSVVTSNPSDSSFTTTYHRLCNDIVPVSATSPPSDSPTSPAIADSLSLQSAYFSGGDPLFNRSPDSSFYKHVAFHVNSARRIPSDGTIDGLYELLGQMNLQQRARRVRSSPARVYHGPRVPLRMRVSSLKGYWSESSGKLCMFGRGFYSNTNNLRDVSVSVVIKLRYPNRVTLLDSLITGSVESFDEINSLHYFEPVSMLTISRSSNYYFTMGGNNIDSNGCVAGSGSNEEESLNLGNVKQGVCYGFLDHVDSFRVEYGSHCNNVSCNLFGGGSGVEKLLGFMGLYRTRCVEGGKIQMLLDFHESEYTDWFLLAHPNTTLISEGVWDENENRLCAVACRILNITGTPYVGDCSIKLTLRFPAVLSLRNRSTILGKIWSDKPVGESGYFGSVGFERISKRSVSLPGGLQYKYTEIGRVRKSCAEKMTARGKGKNYPDVYSSDTAFSMVVTNSEGQVTQGYSLPLFVGDQGYEGRPYGVPFLPTNGGNLKAHSLQFSNSLNVSYAFFLNPSSDFKFGNEISSTEMKISAEGLYNRKTGVMCLIGCRRLRTNDKLLTKNESLDCEIMINIQFPPLNAKGGQPVEGTIASMRQKTDSYYFEPLQLSSYSMSKREADASIWRMDLEIVMVMISNTLACVFVGLQLLHVKKHAEALPRISIVMLLFITLGHMIPLMLNFEALFKVNHNSVQDTFLGSGGWLQVKEVVVRMVTMVAFLLELRLLQLTWSSRQTEESQSQPGLWVSEKWVLFIILPLYFTGGLTAWFVHIWKNHRQKSSRPFRLSRHKFKTPRKHINQLPSLWEDMKSYAGLLLDGFLLPQILFNILSNSEEKPLASLFYFGTTIVRILPHAYDLYRAHSYAWHLGISYIYADHSRDFYSTAWDIGILIGALLFALVVYFQQRFGSRCFLPKRFRGTSAYEKVPVIGNDDL 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08174 937 Pfam Protein of unknown function (DUF2921) 33 916 IPR021319 -
Vivi1g08174 937 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 4 932 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08174 Vivi-Chr1 232481648 232484461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08174 - - gmx:100812795 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08174 1 232481648 232484461 Vivi1g08174 1 232481648 232484461 ECH