Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g08171 ATGAGTGGTGGTTCATTGGGGATTCGTTCTGCTAGTTATGGATCTTTGGAGAAGCAATTGCAGAATGGATTGTCGCCTATTCAAACGGGGAGGAAACAGGTTAAGATGGTTAAGGAGAAAGAGAGATTGTTTCATTGGATCTGTAAATTTGCTGGCAGGAAGAAGGTGGGAATGCTGTTTTTGTGTGTTATATCTGCTGCTGTTTTCGTCTGGGTCTTGTACGTTGGAAAAGGTGAAGATTCACAGGAGGGGAATGGTGTGCAAAACATCAGTGTGAATGAGAGTATGTCTATAAATGATTCTCCGTCTATCGTCTCCGCGGCAAAGGCCATTGCTAAAAATTTGCTGCTACCCCCAAGTTATTTTCTGGGTTATAATCTTCCTCCGGGGCATCCGTGTAATAGTTTTACACTCCCTCCACCACCAGCTGATAAAAAACGTACCGGGCCACGACCATGCCCGGTATGCTACCTTCCTGTGGATGAAGCCATCGGACTCATGCCAGAGTATCCCTCGCCGTCTCCAGTGCTTAAGAATTTAACATTTATCTATGAGGAAAATCTAAGCAGAGATGGAGAATTTGGTGGTTCGGACTTTGGTGGATATCCCACTTTGGCGCAAAGAAATGATTCTTTTGATATACGGGAGTCAATGTGTGTGCACTGCGGATTTGTTAGAGGAATTAAACCTGGCCGCAACACAGGATTTGACATGGATGAAGATGACCTCCTTGATATGGAGCAATGCCGTGGCATAGTTGTCGCGTCAGCCGTATTTGGAAATTTTGATGAGATAAATGAGCCAAAAAACGTAAGCGAGCATTCAAAGAACACTGTATGCTTCCTTATGTTTGTAGATGAAGAAACAGAAAAGTATTTGACGAGTTCTGGCAGGCTGGGAACCAGCAAGAAGATTGGTTTGTGGAGAATTATTGTTGCACGTAATCTTCCTTATACAGATGCAAGACGTACAGGGAAGATTCCAAAGCTTCTACTGCATAGAATGGCTCCAAATGCCCGCTACTCTATATGGCTTGATGGAAAGCTTGAGCTTGTTGTTGATCCATATCAGATTCTTGAAAGGTTTTTGTGGAGGACCAATGCAACTTTTGCAATATCCAAGCATTATAGACGCTTTGATGTATTTGTTGAGGCCGAAGCAAATAAAGCTGCTGCAAAGTATGATAATGCCTCCATTGACTTCCAGATCGATTTTTACAAAAACGAGGGACTGACTCCGTATTCGGAGGCCAAACTTCCTCTTATAAGTGATGTTCCTGAAGGATGTGTAATAATACGAGAGCATATTCCTATTAGCAACCTCTTTACTTGTCTTTGGTTCGGGGAAGTTGACCGATTTACTTCTAGGGACCAGATTAGTTTCTCAACTGTCCGGGACAAATTTTTGTCGCGGGTGGATTTTCATTTTCACATGTTCTTGGATTGCGAAAGACGCAACTTCGTAGTTCAGAAATACCATAGGGGTGTATTAGGGCGGCTATCTGCGCCAGTGGTTGTTGCTCTCAACCCTCCACCGCCACTCTTGTCTCCCCCTCCTCCACTGCATATGCTTGAAAATACACAAGAAAAAGTTATTCCAATAACTAGGAGAGGCCCTGGAAGGCGCGGAAAAGATAAAAGACCGGGTTCTAGGCGCCACCGCAAAGTTGCGGCCGGAAATAGAGACATTGAAGCAAATTAA 1701 0.4392 MSGGSLGIRSASYGSLEKQLQNGLSPIQTGRKQVKMVKEKERLFHWICKFAGRKKVGMLFLCVISAAVFVWVLYVGKGEDSQEGNGVQNISVNESMSINDSPSIVSAAKAIAKNLLLPPSYFLGYNLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVDEAIGLMPEYPSPSPVLKNLTFIYEENLSRDGEFGGSDFGGYPTLAQRNDSFDIRESMCVHCGFVRGIKPGRNTGFDMDEDDLLDMEQCRGIVVASAVFGNFDEINEPKNVSEHSKNTVCFLMFVDEETEKYLTSSGRLGTSKKIGLWRIIVARNLPYTDARRTGKIPKLLLHRMAPNARYSIWLDGKLELVVDPYQILERFLWRTNATFAISKHYRRFDVFVEAEANKAAAKYDNASIDFQIDFYKNEGLTPYSEAKLPLISDVPEGCVIIREHIPISNLFTCLWFGEVDRFTSRDQISFSTVRDKFLSRVDFHFHMFLDCERRNFVVQKYHRGVLGRLSAPVVVALNPPPPLLSPPPPLHMLENTQEKVIPITRRGPGRRGKDKRPGSRRHRKVAAGNRDIEAN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g08171 566 MobiDBLite consensus disorder prediction 540 554 - -
Vivi1g08171 566 Pfam Protein of unknown function (DUF616) 180 493 IPR006852 -
Vivi1g08171 566 PANTHER ALKALINE CERAMIDASE-RELATED 38 494 IPR006852 -
Vivi1g08171 566 MobiDBLite consensus disorder prediction 535 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g08171 Vivi-Chr1 232271034 232277582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g08171 - - gmx:100792761 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g08171 1 232271034 232277582 Vivi1g08171 1 232271034 232277582 ECH