Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07124 ATGAAGCTGTTCTTGTCTTTGCTTCCTCTTATTCTTGTTGCAGTTTTTGGGCTTGTTTCTATAATGAGTCCAGAAGAGAGAGAAAAGGTTGTGGACTTGAGATCTGAAGCGGTGGTGGAAATGGTGGGTGCTGACAATGCTTTCAATCTTTCTTCTTCAACGCCGTTTCTTGTCCATACTATTCAAACACTTCCACAATCTAACGAAACAGAAGTTGTCAACATTTCCAAACCTTGGCTCAACAGTACTGATCCATTGAATGAAACTTATGTGCCTCATTCAAGAAAGCTCAGCATCTTAGATAGAACAGAAGCTGGTTTATTACAAGCTCGAGCCGCCATTAGAGAAGCCATCAATAGCAGTCAAACAGAAGATCTGGATTATGTTCCAATAGGTCCAATGTATTGGAATGCTAAGGCATTTCACAGGAGCTACTTAGAAATGGAAAAACTGTTCAAAGTATTCGTCTACGAAGAAGGGGAGATCCCAGTTTTCCACAATGGACCTTGCAAAAGCATATACTCTATGGAAGGGAACTTTATCCATGCTATTGAAATAAACGACAAATTTCGAACGAGGGATCCTGAAAAAGCACATGTGTTTTTCCTTCCATTCAGCGTGGTAATGTTAGTCAGATTCGTTTATTTAAGAGATTCTCGTGATTTTAGCCCTATAAGAAAAACTGTTACGGATTATATCAATGTCATTTCTGAAAAATATCCGTATTGGAATCGAAGCCTTGGAGCTGATCATTTCATGCTAGCTTGCCATGATTGGGGGCCAGAGACTTCATTTTCCGTACCATACCTCCACGAGAACTCCATTCGCGTACTATGTAACGCCAACACCTCTGAAAAATTCAACCCTGCAAAAGATGTTTCATTACCCGAAATCAATCTCCAAACAGGTTCGATAAATGGTTTTCTAGGGGGACCGTCAGCATCTAAACGTTCGGTTTTAGCTTTCTTTGCAGGAGGACTTCACGGTTATATAAGATCGATTCTTCTTGAACATTGGGAAAACAACAAGGATCCAGACATCATGGTTCAAAAGTATCTTCCAAAGGGTGTTTCTTACTATGAAATGTTAAGGAAGAGTAAGTTCTGTCTCTGTCCAAGTGGTTACGAGGTGGCTAGTCCGAGATTAGTCGAGGCAATTTACACAGGTTGTGTTCCAGTGCTTATTTCAGATCATTATGTTCCTCCGTTTAGTGATGTTTTGAATTGGAAGTCTTTTTCGGTCGAGGTTTCGGTTGAGGATATTCCGAAGTTGAAGGATATTTTGATGAGAATAACTCCGACGCAGTATATAAGAATGCAGAGAAGAGTTGGACAGATTAGGAGACATTTTGAGGTACATTCTCCACCAAAGAGATTTGATGTGTTTCATATGATACTTCATTCTGTTTGGCTTAGAAGATTGAACTTTAGAGTCCATGATGATCAATAA 1449 0.3975 MKLFLSLLPLILVAVFGLVSIMSPEEREKVVDLRSEAVVEMVGADNAFNLSSSTPFLVHTIQTLPQSNETEVVNISKPWLNSTDPLNETYVPHSRKLSILDRTEAGLLQARAAIREAINSSQTEDLDYVPIGPMYWNAKAFHRSYLEMEKLFKVFVYEEGEIPVFHNGPCKSIYSMEGNFIHAIEINDKFRTRDPEKAHVFFLPFSVVMLVRFVYLRDSRDFSPIRKTVTDYINVISEKYPYWNRSLGADHFMLACHDWGPETSFSVPYLHENSIRVLCNANTSEKFNPAKDVSLPEINLQTGSINGFLGGPSASKRSVLAFFAGGLHGYIRSILLEHWENNKDPDIMVQKYLPKGVSYYEMLRKSKFCLCPSGYEVASPRLVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVEDIPKLKDILMRITPTQYIRMQRRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVHDDQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07124 482 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 115 469 IPR004263 GO:0006486|GO:0016757
Vivi1g07124 482 Pfam Exostosin family 149 430 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07124 Vivi-Chr1 172817466 172819633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07124 - - gmx:100806278 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07124 1 172817466 172819633 Vivi1g07124 1 172817466 172819633 ECH
Vivi6g05841 6 166128823 166132531 Vivi1g07124 1 172817466 172819633 PCT