Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07000 ATGACTATGCAAATAAAAGAGCAAAAGAATGAAACTGAGAAGAAAGCTGACGACGGAGCTAAGAAAGACGACAGTCTCCCTCCTGTCGTTTACAAACTCGACTTGCATTGTGAAGGATGCATCAAGAAGATTAAACGTTCCGCTCGTCATTTTGCCGGTGTGGAAACAGTTAAAGCAGATCTAGCTTCAAACAAAGTGACGGTTACTGGTAAATTTGACGCTGTTAAACTTCAAGAAAAATTGGCTGAGAAAGCTAAGAAGAAAGTCGACATCATCTCAGCGCCGCCAAAAAAAGACGACGCCGCCGCGGAAAAACCGTCGGAAAAGAAGGCTGAGGAGAAAAAGCCTGAAGAGAAGAAAGCCGAAGAGAAGAAACCAGAAGAGAAAAAACCAGAAGAAAATAAGCCTAAAGAGAGTACGGTGGTTTTGAAGATCAAATTACACTGTGACGGTTGCATTACGAAAATTAAAAGGATCATTCTGAAGTTTAAAGGGGTAGAAACGGTAAACCTTGACGGAGATAAGGATTTGGTAACAGTGAAAGGAACAATGGAACCGAAGGCGTTGGTGGAGTATCTTACAGAGAAGCTAAAGAGAAACGTTGAAATGGTAGTACCGAAGAAAGAAGAGAAGAAAGAGAAAGACGGTGGCGGAGAGAAGAAAGAGAAGAAAGAAGAAGGTGGTGGTGAGAAGAAAATCGACGGTGGAGATCAAGCGAAGGTGGAGGTTAATAAAATGGAGTATCAGTACCCGATGCAAGCTCCAATGTATTGGTACGATGGAGGTGCGGGGCAAAGTAGTAATTATGGTATGGATCAGTTTCATCAACCTGGTTATGGTCATTATGATCAACCTGGCTATGGCCATTATGATCAACCTGGGTATATGATGAATCAAGGCGGTGGTGGCGGTTATCCTGTGCAGGCGCCACAGGTTCCGTTTTATATGAACCCTAGTCATCCTCCACCGCAGATGTTTAGTGATGAGAATCCCAATGCTTGTTCTGTGATGTGA 1014 0.4329 MTMQIKEQKNETEKKADDGAKKDDSLPPVVYKLDLHCEGCIKKIKRSARHFAGVETVKADLASNKVTVTGKFDAVKLQEKLAEKAKKKVDIISAPPKKDDAAAEKPSEKKAEEKKPEEKKAEEKKPEEKKPEENKPKESTVVLKIKLHCDGCITKIKRIILKFKGVETVNLDGDKDLVTVKGTMEPKALVEYLTEKLKRNVEMVVPKKEEKKEKDGGGEKKEKKEEGGGEKKIDGGDQAKVEVNKMEYQYPMQAPMYWYDGGAGQSSNYGMDQFHQPGYGHYDQPGYGHYDQPGYMMNQGGGGGYPVQAPQVPFYMNPSHPPPQMFSDENPNACSVM 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07000 337 Gene3D - 28 100 - -
Vivi1g07000 337 Gene3D - 137 211 - -
Vivi1g07000 337 CDD HMA 35 71 IPR006121 GO:0046872
Vivi1g07000 337 ProSiteProfiles Heavy-metal-associated domain profile. 26 90 IPR006121 GO:0046872
Vivi1g07000 337 SUPERFAMILY HMA, heavy metal-associated domain 140 195 IPR036163 GO:0046872
Vivi1g07000 337 CDD HMA 142 191 IPR006121 GO:0046872
Vivi1g07000 337 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 7 337 IPR044594 GO:0046872
Vivi1g07000 337 MobiDBLite consensus disorder prediction 7 28 - -
Vivi1g07000 337 SUPERFAMILY HMA, heavy metal-associated domain 30 86 IPR036163 GO:0046872
Vivi1g07000 337 MobiDBLite consensus disorder prediction 207 238 - -
Vivi1g07000 337 MobiDBLite consensus disorder prediction 1 28 - -
Vivi1g07000 337 Pfam Heavy-metal-associated domain 34 86 IPR006121 GO:0046872
Vivi1g07000 337 Pfam Heavy-metal-associated domain 144 201 IPR006121 GO:0046872
Vivi1g07000 337 ProSiteProfiles Heavy-metal-associated domain profile. 138 209 IPR006121 GO:0046872
Vivi1g07000 337 MobiDBLite consensus disorder prediction 92 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07000 Vivi-Chr1 167751195 167752952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07000 - - ccaj:109790448 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07000 1 167751195 167752952 Vivi1g07000 1 167751195 167752952 ECH
Vivi6g04151 6 140433864 140436052 Vivi1g07000 1 167751195 167752952 PCT