Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06857 ATGGCGGCCGTTACCCGCCTTTCTACGCGCGTCTCTTCCATCGCAAAGCGATATCTATCCTCCGAGCTCACCTCCCACGCGCCACTCCCTCTTGTTCCTACGCGCGGAGAAGATCAGAAGAACCGCCACGTACGGTGGGTCTTCCTCGGTTGTCCTGGCGTCGGGAAAGGGACATACGCTAGCCGTTTATCTAATCTCATCGGCGTTCCTCACATCGCCACCGGTGATCTCGTTCGCGAAGAACTCGCTTCCTCTGGTCCTCTCTCTTCACAGCTATCAGAAATTGTAAATCAAGGTCAACTGGTGTCAGATGAAATTATTATAAATTTATTGTCAAAGAGACTTGTCGCCGGGGAAGCTAAAGGAGCTCTGGGATTTATTCTTGATGGTTTTCCGCGAACAATTAAGCAAGCAGAAATATTGGAAGGGGTAACTGATATTGACTTGGTTATCAATCTAAGGCTTCGAGAAGATGTACTGCTTGAGAAATGCCTTGGTAGGAGGATTTGCAATGAGTGTGGAGGAAATTTTAATGTTGCTTCCATTGACATCAAGGCTGAGAATGGAAGCCCTGGAATTGTCATGGCTCCGCTTCTTCCTCCTGCCAATTGTATGTCGAAGCTCACTACTCGGTCAGATGATACTGAACCAGTTGTCAAAGAAAGGCTTCGGATATACAATGAATTGAGTCGGCCTGTGGAGGAGTTTTACCGCAACAGAGGAAAATTATTAGAGTTTAATCTACCTGGAGGAATCCCAGAATCTTGGCCAAAGTTGCTACATGCTCTTAATCTTGATGATTATGAGGATAAGCACTCTGCTACAGCATAA 831 0.4657 MAAVTRLSTRVSSIAKRYLSSELTSHAPLPLVPTRGEDQKNRHVRWVFLGCPGVGKGTYASRLSNLIGVPHIATGDLVREELASSGPLSSQLSEIVNQGQLVSDEIIINLLSKRLVAGEAKGALGFILDGFPRTIKQAEILEGVTDIDLVINLRLREDVLLEKCLGRRICNECGGNFNVASIDIKAENGSPGIVMAPLLPPANCMSKLTTRSDDTEPVVKERLRIYNELSRPVEEFYRNRGKLLEFNLPGGIPESWPKLLHALNLDDYEDKHSATA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06857 276 CDD ADK 45 247 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 263 IPR027417 -
Vivi1g06857 276 Hamap Adenylate kinase [adk]. 44 264 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 Gene3D - 33 267 IPR027417 -
Vivi1g06857 276 PRINTS Adenylate kinase signature 75 89 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 PRINTS Adenylate kinase signature 47 60 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 PRINTS Adenylate kinase signature 211 226 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 PRINTS Adenylate kinase signature 228 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 PRINTS Adenylate kinase signature 126 142 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vivi1g06857 276 NCBIfam adenylate kinase 45 263 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vivi1g06857 276 ProSitePatterns Adenylate kinase signature. 126 137 IPR033690 -
Vivi1g06857 276 Pfam Adenylate kinase 49 241 - -
Vivi1g06857 276 PANTHER NUCLEOTIDE KINASE 24 260 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06857 Vivi-Chr1 162091294 162094861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06857 K00939 - gmx:100777619 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06857 1 162091294 162094861 Vivi1g06857 1 162091294 162094861 ECH
Vivi6g04247 6 142121621 142123879 Vivi1g06857 1 162091294 162094861 PCT