Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06717 ATGGAGAACTTGTTCCGCCTAGTCGACAACAAACAAGACTCAATCTCACCTCGTTGCATTTGGGTTAACGGTCCCATAATCATAGGAGCAGGACCATCAGGCTTAGCAACAGCAGCATGTCTCAAACAACAAGGAGTGCCCTTCATGATTCTCGAAAGATCAAACTGCATAGCTTCACTCTGGCAAAACAGAACCTACGACAGACTCAAACTACACCTCCCAAAACAATTCTGCCAACTACCCAACTTCCCATTCCCACAAGACTTCCCTGAATATCCAACCAAGAAACAGTTCATAAACTACCTCGAATCATACACGAAACACTTCGAAATCAACCCGCAGTTCAACGAGTGTGTTTCGTCTGCTAAATATGACGAGACTAGTGGATTATGGAGAGTTAAAACCAAAACTAAAACTAAAACTAAAACTAAAACCGTTTCCAATGAAAATGAGGTTGAGTATATTTGTAGGTGGCTTGTTGTTGCTACTGGCGAAAATGCAGAGTGTGTTGTGCCTGATATCGAAGGGTTGAGTCAATTCAATGGCGAAGTTATTCATGCTTGTGATTATAAATCGGGTGAACGTTTTCGAGGAAAGAAAGTCTTGGTTGTTGGTTGTGGGAATTCCGGAATGGAACTAGCTCTTGATCTTTGCAATTATAATGCATCACCCTCTATTGTTCTTCGCAGCTCGGTTCATGTGTTGCCTAGAGAAATGTTGGGGAGATCGACATTTGAATTGGCGGTTATGATGATGAAATGGTTACCTATTTGGTTGGTTGACAAGATTTTGTTGATGTTGGCTTGGTTGGTTTTTGGGAATATAGAGAAGTATGGGATTAAGAGGCCATTGGAGGGTCCTTTGGAGCTGAAGAATACAAAGGGTAAAACACCTGTTTTGGATATTGGTACCTTGGGGAAAATTAGATCTGGGGATATAAAAGTAGTTCCTGGAATTAAGAGGTTTTGTGATGGTTTTGTTGAGCTTGTTAATGGTGAAAAGATTGAAGTTGATGCTGTTGTTCTTGCTACTGGTTATAGGAGCAATGTTCCTTCTTGGCTTAAGGAAGGCGAGTTTTTCTCAAAGAATGGATTTCCAAAGTCACCATTTCCAAATGGTTGGAAAGGAAATGTTGGACTTTATGCAGTTGGGTTTACAAAGAGAGGGCTCTCTGGTTCATCATATGATGCTATGAAAATTGCACAAGATATTGGTCAAGTTTGGAAACAAGAAACTAGGCAAAAGAAACAACGTATTAAAGCTTGTTATAGACGTTGTATTTCTCAATTCTAA 1293 0.4022 MENLFRLVDNKQDSISPRCIWVNGPIIIGAGPSGLATAACLKQQGVPFMILERSNCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPQDFPEYPTKKQFINYLESYTKHFEINPQFNECVSSAKYDETSGLWRVKTKTKTKTKTKTVSNENEVEYICRWLVVATGENAECVVPDIEGLSQFNGEVIHACDYKSGERFRGKKVLVVGCGNSGMELALDLCNYNASPSIVLRSSVHVLPREMLGRSTFELAVMMMKWLPIWLVDKILLMLAWLVFGNIEKYGIKRPLEGPLELKNTKGKTPVLDIGTLGKIRSGDIKVVPGIKRFCDGFVELVNGEKIEVDAVVLATGYRSNVPSWLKEGEFFSKNGFPKSPFPNGWKGNVGLYAVGFTKRGLSGSSYDAMKIAQDIGQVWKQETRQKKQRIKACYRRCISQF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06717 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 200 218 - -
Vivi1g06717 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 25 44 - -
Vivi1g06717 430 PRINTS Pyridine nucleotide disulphide reductase class-I signature 159 168 - -
Vivi1g06717 430 PRINTS Pyridine nucleotide disulphide reductase class-I signature 24 46 - -
Vivi1g06717 430 PRINTS Pyridine nucleotide disulphide reductase class-I signature 200 225 - -
Vivi1g06717 430 FunFam Flavin-containing monooxygenase 25 413 - -
Vivi1g06717 430 Pfam Flavin-binding monooxygenase-like 27 351 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vivi1g06717 430 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 26 418 - -
Vivi1g06717 430 Gene3D - 25 414 IPR036188 -
Vivi1g06717 430 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 193 365 IPR036291 -
Vivi1g06717 430 SUPERFAMILY FAD/NAD(P)-binding domain 26 263 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06717 Vivi-Chr1 157154734 157156879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06717 K11816 - gmx:100796169 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06717 1 157154734 157156879 Vivi6g03764 6 132709413 132711513 PCT