Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06687 ATGGCTTCAGATTCCAAATCAAATCTTAAAATCACCATACAAAGCCATCCTTCAGAATCAACCTTAGCTGAACTCAACATCAAGTGTTGGCCCAAATGGGGGTGTTCACCAGGTAAATACCAGTTAAAGTTTGATGCAGAGGAAACATGCTATCTGTTGAAAGGAAAAGTTAAAGCATACACAAAAGGGTCATCAGAGTATGTAGAGTTTGGAGCTGGAGATCTTGTGACAATTCCAAAAGGACTAAGTTGTACTTGGGATGTTTCTGTTGCTGTTGATAAGTACTACAAATTTGAAGCTTCATCATCTTCTTAA 315 0.381 MASDSKSNLKITIQSHPSESTLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSEYVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEASSSS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06687 104 PANTHER OS04G0445200 PROTEIN 6 99 - -
Vivi1g06687 104 CDD cupin_TM1112-like 30 98 - -
Vivi1g06687 104 Gene3D Jelly Rolls 2 98 IPR014710 -
Vivi1g06687 104 SUPERFAMILY RmlC-like cupins 25 96 IPR011051 -
Vivi1g06687 104 Pfam EutQ-like cupin domain 23 96 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06687 Vivi-Chr1 154898839 154899656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06687 - - gmx:100793722 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06687 1 154898839 154899656 Vivi1g06687 1 154898839 154899656 ECH
Vivi6g03752 6 132542820 132543776 Vivi1g06687 1 154898839 154899656 PCT