Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06439 ATGCTGCTCAGAAACAGATCAAGAGTTGTAACCAAACAAACTCTGATGGGTGAACAATCATCACCAAGTCAGAACTTCACTACTACAATCCCATCTCTGTTTGGTTCATCAAACTATAGAGACTTTCATTTCACTTCCAAAAAAGCTGAATCTTTGATAAGTCCAACATCGATTCTTGACACAAAAGCTTTAACTCAGTTTGAGAATCCTTTCTCAAGGGTTGATCAGTACAAAGGTTGTAGCTCAAGGGACAAAGTAGATTTGAACATCATAGGACTTGGTCTTGTTGGTGTTCTAAAAGATGAACCACCTTTTCAACAAACTTCTGAGAAACTAAGGAAAAAAGTTGTGTTTGGAACTGATAAGCTTAGAGTGAAAATCCCTCCTCTACCAACTTCCACGTTTGAGTCAAAAAGTGATTATGGTTGCAAAATGAATGATTCAGAAAAGGGTGTTCTTAGTTTGAGTGAAATGGAGGTTTATGAAGAATACACATGTGTGATATCTCATGGAGCAAATCCAAAAACAACACATATATTTGATAATTGTGTTGTGGGAAGTTACTCTTCTGTGCCTAATAGTCCTCACTCTTTTTCACTCAATTTTCTTAGCTTTTGTTACACTTGCAAAACTCATCTTCAGCATACAAAAGACATCTTCATTTACAGAGGAGAAAAAGCATTTTGTAGTCAAGAATGTCGAAACCAAGAGATGATGTTAGATGAAGAAGAAAATTAA 738 0.3577 MLLRNRSRVVTKQTLMGEQSSPSQNFTTTIPSLFGSSNYRDFHFTSKKAESLISPTSILDTKALTQFENPFSRVDQYKGCSSRDKVDLNIIGLGLVGVLKDEPPFQQTSEKLRKKVVFGTDKLRVKIPPLPTSTFESKSDYGCKMNDSEKGVLSLSEMEVYEEYTCVISHGANPKTTHIFDNCVVGSYSSVPNSPHSFSLNFLSFCYTCKTHLQHTKDIFIYRGEKAFCSQECRNQEMMLDEEEN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06439 245 Pfam zinc-finger of the FCS-type, C2-C2 199 243 IPR007650 -
Vivi1g06439 245 ProSiteProfiles Zinc finger FLZ-type profile. 201 245 IPR007650 -
Vivi1g06439 245 PANTHER FCS-LIKE ZINC FINGER 8 3 244 IPR044593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06439 Vivi-Chr1 145554506 145555749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06439 - - mtr:11434150 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06439 1 145554506 145555749 Vivi1g06439 1 145554506 145555749 ECH
Vivi6g03963 6 136445655 136447454 Vivi1g06439 1 145554506 145555749 PCT