Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06082 ATGGCTTGTTGGTCTGCAGAAAATGCCACAAAGGCCTATCTTAGCACATTAAAAATGGGTCAAAAAGCCAAAGAACCAAACGTAGCTGAATTTATATCAGCACTAGCAGCAGGAAACAATGCACAAATGATGATTGTAGCATGTGCTACAGTTGCAGATTCCACCACACTAGCTTTAATTGCTGCTGCGAATCAAACTGGTGGAAAAGTGATTTGTATTGTGCCTAACCATAAAGCTCTAAAAGCATCCAAACATGTCTTAGGAAAAGCTTCTCATCAAGTTGAGTTCATAGTTGGAGAGCCTCAAGAAGTGCTTGTGTTGGAAGAATATGAAGGAGCTGATTTTTTGCTTATTGATTGTAACATTGAAAACCATGAAGAGATTTTGAAAGCAATAGAGGAGGGTAGAAAGGTAAATGATGGGGCTATTGTTGTAGGGTATAATGCATTTAGTTGCAAAGGGTCATGGTTGTCAAGTGGATCCAAGACTCAGCTTTTGCCTATTGGAGAAGGGCTTTTGGTCACTAGGTTTGGGATGGTTGGGAATAGTCCAAAATATGGGACAAGTAGAACAATGGGGAAGGTTAAAAGTCATTGGGTTGTTAAGGTTGATAAATGCACTGGTGAGGAACATGTGTTTAGGGTTAGATCTCCTCACGGGAAAGTTGTTCATGCTTGA 678 0.4027 MACWSAENATKAYLSTLKMGQKAKEPNVAEFISALAAGNNAQMMIVACATVADSTTLALIAAANQTGGKVICIVPNHKALKASKHVLGKASHQVEFIVGEPQEVLVLEEYEGADFLLIDCNIENHEEILKAIEEGRKVNDGAIVVGYNAFSCKGSWLSSGSKTQLLPIGEGLLVTRFGMVGNSPKYGTSRTMGKVKSHWVVKVDKCTGEEHVFRVRSPHGKVVHA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06082 225 Gene3D Vaccinia Virus protein VP39 5 178 IPR029063 -
Vivi1g06082 225 Pfam Protein of unknown function (DUF1442) 3 214 IPR009902 -
Vivi1g06082 225 PANTHER DUF1442 FAMILY PROTEIN 3 214 IPR009902 -
Vivi1g06082 225 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 55 152 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06082 Vivi-Chr1 135510623 135511828 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06082 - - gmx:100775961 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06082 1 135510623 135511828 Vivi1g06082 1 135510623 135511828 ECH