Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06077 ATGTCTGGCTCAAGCGATTCTTTGGTGATATCATTTGGTGAGATGCTTATTGATTTTGTTCCGGATACATCTGGTGTATCTTTAGCTGAGTCTCTTGGTTTCCTCAAAGCTCCTGGTGGTGCTCCGGCTAACGTGGCTTGTGCCATAGCCAAACTTGGTGGCAATGCTGCCTTCATCGGCAAGGTTGGTGAGGATGAATTCGGAAGGATGCTAGCTAACATATTAAAGAAAAATGGTGTGAACACAGACGGTGTTCTTTTCGACAAAGAGGCTAGAACTGCATTAGCTTTCGTAACCTTGAGGAAAGATGGAGAGAGGGAGTTCATGTTTTATAGAAACCCTAGTGCTGATATGTTGCTAACAGAATCTGAACTGAAAATGGATTTAATCAAGAAGGCTAAGATATTCCATTATGGATCCATCAGTCTTATTACCGAACCATGCAGATCTGCTCACATGGCTGCCATGAAAGCTGCTAGAGAAGGTGGTGCTTTGTTGTCCTATGATCCAAATGTTAGGCTACCTTTGTGGCCTTCTGCTGAGGCTGCTAGGTCTGGAATCAAAAGTATTTGGCATGAGGCTGATTTCATCAAGGTGAGTGATGATGAAGTTGAATTTCTTACACAAAAAGATCCTCAGAATGAAGAAGTTATTAAGTCTTTGTGGCACGACAAGTTGAAGCTGCTTCTCATCACTGATGGTGAAAAGGGTTGCAGATATGTCACTAAGAATTTTAAAGGAAGGGTAAATGGATTCCCTGTGAAAGCTATTGACACAACTGGTGCTGGTGATGCTTTTGTTGGTGCACTTCTCACAGCTGTGGCCAAAGACACTTCCATTTTTGATAATGAGGCAAAACTGAAAGAGGCCTTGACATTTTCAAATGCTTGTGGAGCAATATGTACAACACAGAAGGGAGCCATTCCTGCACTTCCAACTGCTGACGAAGCTAAGAAATTCATCTCCAGCTCTAAAAATTAA 981 0.423 MSGSSDSLVISFGEMLIDFVPDTSGVSLAESLGFLKAPGGAPANVACAIAKLGGNAAFIGKVGEDEFGRMLANILKKNGVNTDGVLFDKEARTALAFVTLRKDGEREFMFYRNPSADMLLTESELKMDLIKKAKIFHYGSISLITEPCRSAHMAAMKAAREGGALLSYDPNVRLPLWPSAEAARSGIKSIWHEADFIKVSDDEVEFLTQKDPQNEEVIKSLWHDKLKLLLITDGEKGCRYVTKNFKGRVNGFPVKAIDTTGAGDAFVGALLTAVAKDTSIFDNEAKLKEALTFSNACGAICTTQKGAIPALPTADEAKKFISSSKN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06077 326 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016301
Vivi1g06077 326 Gene3D - 5 326 IPR029056 -
Vivi1g06077 326 FunFam Probable fructokinase-2 6 325 - -
Vivi1g06077 326 PANTHER HEXOKINASE FAMILY MEMBER 8 320 - -
Vivi1g06077 326 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016301
Vivi1g06077 326 CDD bac_FRK 8 308 - -
Vivi1g06077 326 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Vivi1g06077 326 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06077 Vivi-Chr1 135418230 135420596 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06077 K00847 - gmx:100791294 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06077 1 135418230 135420596 Vivi1g06077 1 135418230 135420596 ECH