Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05498 ATGGCCTCTCACGATCAAACTCACACAAACGGCACCGTTTCAAAGAAACCCAAACTCCGTCCCTCTCAAATCACCGACGCCGAAATCCAAACCGAATTCTCCCACCACGACCCCACCGTCGCGCGTCTCAACAACGGCGCCTTCGGTTGCTGTCCATCCTCCGTCCTCCGCGCCCAACGCGAATGGCAGCTCAAGTTCCTCCGTCAGCCAGATCACTTCTACTTCAACTACCTCAAAAAAGGAATCCTCCACTCCCGAACCATCATCAAAGAACTCGTCAACGCCAACCACGTCGACGAAATCTCCATCGTCGATAACGCCTCCACCGCCACCGCTATCGTCCTTCAGCAAGCCACATGGGCTTTCCACGAAGGGAGGTTCAATAAAGGAGACGCCGTCGTCATGCTTCACTACGCTTACGGCTCGGTGAAAAAAGCAATCGAAGCGTACGTCACACGCGCCGGCGGACGAGTCATCGAGGTTCATCTCCCCTTTCCGATCACATCCGAAGACGACATCATCCGCGAGTTTCGTCACGCGCTGGAGAAAGCAAAGAGCGAAGGTAATAACAATAAAGTCAGATTAGCGGTTATCGATCATGTAACTTCTATGCCGAGCGTGGTGATTCCGGTGAAGAAATTAGTTCAAATTTGCAAAGAAGAAGGTGTTGATCAGGTTTTCGTCGACGCGGCGCACGCCATCGGATGCATCCCGCGCGTCGATATGCAAGAAATCGGAGCAGATATTTACACAAGCAATCTACATAAGTGGTTCTTTTGTCCATCTTCGGTCGCGTTTATCTACGCTCGCAAATCGGCTAATTCATTTGATTTGCATCACCCTGTTGTGTCACACGAGTACGGTAATGGACTAGCAATAGAAAGTGCATGGATTGGGAATAGAGATTACAGTGCACAATTAGTGGTTCCTACTGTTATGGAATTTGTGAATAGGTTTGAAGGTGGAATTGAAGGAATAAAAAAGAGGAATCATGATCGTGTAATTGAGATGGGTGAAATGTTGGTGGAAGCTTGGGGGACACATCTTGGGACACCACATAATATGAGTGCGAGTATGGTTATGGTTGGTTTGCCTTCTTGTTTGGGGATTATGAGTGATTGTGATGCTATGAATCTTAGGACATATTTGAGGGAGTTTTTTAAGGTTGAGGTTCCAATTTATTTTAGAGATGGGGTTGGGGAAGTTGGAGGTGTGACTGGGTATGCTAGGATTTCTTATCAGGTGTATAATAAAGTTGAGGATTATTATAAGTTTAGGGATGCGATTAACAAACTTGTGAGTGATGGATTCACTTGTGCTGATCTTAACACTTCAACTAATGGTACTGTGGTCTAG 1356 0.469 MASHDQTHTNGTVSKKPKLRPSQITDAEIQTEFSHHDPTVARLNNGAFGCCPSSVLRAQREWQLKFLRQPDHFYFNYLKKGILHSRTIIKELVNANHVDEISIVDNASTATAIVLQQATWAFHEGRFNKGDAVVMLHYAYGSVKKAIEAYVTRAGGRVIEVHLPFPITSEDDIIREFRHALEKAKSEGNNNKVRLAVIDHVTSMPSVVIPVKKLVQICKEEGVDQVFVDAAHAIGCIPRVDMQEIGADIYTSNLHKWFFCPSSVAFIYARKSANSFDLHHPVVSHEYGNGLAIESAWIGNRDYSAQLVVPTVMEFVNRFEGGIEGIKKRNHDRVIEMGEMLVEAWGTHLGTPHNMSASMVMVGLPSCLGIMSDCDAMNLRTYLREFFKVEVPIYFRDGVGEVGGVTGYARISYQVYNKVEDYYKFRDAINKLVSDGFTCADLNTSTNGTVV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05498 451 MobiDBLite consensus disorder prediction 1 21 - -
Vivi1g05498 451 SUPERFAMILY PLP-dependent transferases 34 433 IPR015424 -
Vivi1g05498 451 Gene3D - 69 306 IPR015421 GO:0003824
Vivi1g05498 451 PANTHER L-CYSTEINE DESULFHYDRASE 22 441 - -
Vivi1g05498 451 Pfam Aminotransferase class-V 78 273 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05498 Vivi-Chr1 120762572 120764168 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05498 K22207 - gmx:100796732 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04771 6 151042173 151072185 Vivi1g05498 1 120762572 120764168 PCT