Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05368 ATGGGTGCAGATGAACCACAGCTCGACGACAAAGCAAAGAGAATGCGAGATCTGCTATCCAGTTTCTACTCTCCAGACCCTTCCATCTCTTCCAACTCCACCGGCATCACTTCCCCCAAACACGCTTCTATCGATGACATTAACTCCTCCGAATTCGATCCCGATCAATACATGAACATACTCGTATATAAGTCGAATTTGGAAGGGTTACTTCAGCGACATGTTGAAATGGCAGCTGAAATTAAGAATCTTGATACTGATTTGCAAATGCTTGTTTACGAGAATTATAACAAGTTCATTAGCGCTACAGATACTATAAAGAGGATGAAAAGTAACATTTCAGGGATGGAGACTAATATGGAACAGCTTCTTGACAAGATAATGTCTGTGCAGTCAAGGAGTGACAATGTGAACACTTCATTATTTGACAAAAGGGAGCATATTGAAAAACTTCATAGGACTTGCAATCTTCTTCGGAAAGTTCAGTTTATATATGATCTTCCTGATAGACTTGGCAAGTGCATCAAGTCGGAGGCGTATGCAGATGCAGTTAGGTTTTACATTGGAGCAATGCCAATTTTTAAGGCATATGGAGATTCATCGTTTCAGGACTGTAAGCAAGCATCTGAAGAAGCAATAGCTAATGTAATAAGAAACCTGCAGGGGAAGCTATTTTCAGATTCTGAATCAATACAAGTGAGAGCCGAGGCTGCAGTGCTCCTTAAGCAGTTGGATTTTCCGGTGAACAATTTGAAGGCACAGTTACTTGAGAAATTAGAACAGTCCATTACAGACATTCAACTGAGCCCTGAGGAAATAAACATTGCTTCGGGAGACTTTTCTCCTTCAGCATCTCCTCACAAGGCAACAACTCATGAATTTATGGAGGCAGTTCGTGCTCTTTTAGTCATATTTCCGGATTCAGAAAAGCAGTTAATCAAACTCGCTCAAGATTTGGTTACAAAGAATTTTGTGATTGCAAAGGAATATGTAAAGACACGGATTCACCCAGCAGATCTACTCGGTGTTCTTCGAGTTGTTTGGAATGATGTACTTCTGATAGATGAAGTCTTGCCGGAAGCAACTCTCTCTAACCATTCTCTTCAGGCTGCAAGTGCTGTTGTTACGGTGTATGTTAGAAGTACATTTTCTCATCTTCTGGAAGACATCTCAGACTCCTTCTTACAAGTCCTGAAAAAGGATGGAGCAGAGCAGTACTCTCTTGAAGCTGTTCTTGATGCTAGTACAAAAGCAGTTCTGCAAGGAGGCATGAACATCTTGTTGGACTTCCGCAAAATTTTAGATGATGACTCTGGGATCTTAGTTAGACTAAGAGAGTTATTTGTTGATTTGGTTCAAGAAGGATTTCAAGATTTTTTTAGGCAACTTGAAGATCAGTTCCTCCTATTTTCGGGAAGAAATAATTCTTCAGCTATTCAAGTTCATGGTTTGGCGGCAGAGGGAGCTATTGTTGAAAAAGCTTTTCCTGGCCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTTATTGAACAAACTGTCATCCCCAAAATCACTGAGGAAATAGCTGCTTCCTTTTCTGGTGGTAGTGTTAGAGGCTATGAATCTAGACCTGCATTTATTCCTGGAGAAATATGTAGAAAATTCCGCTCAGCTGGTGAAAAATTCCTGCACCTGTACATAAATATGAGAACTCAAAGGATTTCACTTATTCTGAAGAAGAGGTTTACAACACCTAATTGGCTTAAGCATAAGGAGCCAAGAGAAGTGCACATGTTTGTTGATTTTTTTCTTCAAGAGCTTGAAGCTATAGTTAATGAAGTGAAGCAGATTTTGCCTCAAGGCACACGTAAGCACCGCAGGACGGATAGTAATGGAAGTAGTGTTTCATCAAGGAGTAACCCCTTGCGGGAGGAGAAATTGGGTAGGTCAAATACTCAAAGGGCAAGGAGCCAGCTTCTGGAAACACATCTAGCAAAACTGTTTAAGCAAAAAGTTGAAATTTTCACAAAAATAGAATATACACAGGAGTCCGTTGTTACTACTGTAGTGAAACTCTGCCTGAAAAGTTTACAAGAATTTGTCCGTCTCCACACTTTTAACAGGAGTGGATTCCAACAAGTTCAACTGGATATCCTGTTCCTGAGGACCCCTTTTAGGGAAATAGTTGAAGATGAAGCCGCAGTCGATTTCTTGCTTGATGAGGTGATTGTTGCTACTGCTGAGCGGTGTCTCGATCCAATTCCATTGGAGCCTCCCATTCTGGACAAACTTATACAAGCAAAGTTGACTAAAACCAAGGAACAGAGTACAACAGTCTCTTCGTAA 2325 0.4077 MGADEPQLDDKAKRMRDLLSSFYSPDPSISSNSTGITSPKHASIDDINSSEFDPDQYMNILVYKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLDKIMSVQSRSDNVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYIGAMPIFKAYGDSSFQDCKQASEEAIANVIRNLQGKLFSDSESIQVRAEAAVLLKQLDFPVNNLKAQLLEKLEQSITDIQLSPEEINIASGDFSPSASPHKATTHEFMEAVRALLVIFPDSEKQLIKLAQDLVTKNFVIAKEYVKTRIHPADLLGVLRVVWNDVLLIDEVLPEATLSNHSLQAASAVVTVYVRSTFSHLLEDISDSFLQVLKKDGAEQYSLEAVLDASTKAVLQGGMNILLDFRKILDDDSGILVRLRELFVDLVQEGFQDFFRQLEDQFLLFSGRNNSSAIQVHGLAAEGAIVEKAFPGLVLVLAQLSAFIEQTVIPKITEEIAASFSGGSVRGYESRPAFIPGEICRKFRSAGEKFLHLYINMRTQRISLILKKRFTTPNWLKHKEPREVHMFVDFFLQELEAIVNEVKQILPQGTRKHRRTDSNGSSVSSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFTKIEYTQESVVTTVVKLCLKSLQEFVRLHTFNRSGFQQVQLDILFLRTPFREIVEDEAAVDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLTKTKEQSTTVSS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05368 774 MobiDBLite consensus disorder prediction 613 647 - -
Vivi1g05368 774 Pfam Vps51/Vps67 47 132 - -
Vivi1g05368 774 Coils Coil 106 133 - -
Vivi1g05368 774 MobiDBLite consensus disorder prediction 23 42 - -
Vivi1g05368 774 PANTHER UNCHARACTERIZED 7 769 IPR014812 -
Vivi1g05368 774 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05368 Vivi-Chr1 117483077 117490923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05368 K20296 - gmx:100818891 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05368 1 117483077 117490923 Vivi1g05368 1 117483077 117490923 ECH
Vivi6g04614 6 148439561 148448383 Vivi1g05368 1 117483077 117490923 PCT