Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05362 ATGGGAAACCAAATCTCATTTCGACCTTCAGATTCAAGAGGTAAAGTTGTTTTCTTAGATGGTTCGGTTCATGAGTTTGACGAACAGATAACCGCGGCCGAGCTAATGATGGATCATCCACAGAAAGTAGTAGTTGAGTTTCATTCAGCTGTGAATCAGAAGAGGCCAGCACCATTGCCTGCTGACAAGAAGCTAGAGATGAATAAGATATATCTGATGCTTCCGGTGAAGCAAGGGAAGGCTGTTGGTTTGAGCGGCGAAGAAACTCGGCGTGTTTTGTTGATGGTTAATTCTGTTTTGCATTCTAATTATGTTTTGTGTTCTTCTAAGTTTCTTCCTTGGTTTAGTAGTTTTTGTCATAGTAGTGAAATTGTGGAGCCAAGGAGAAAGGAGGAGGTGGAGGAGGAGGAGAAGGGAGTGAGATGCGGTTTTTCGGAGAATTTGCCGGAAATATTGGAAGGGAGGCCGGATTATTTGAATAGGCAGATTTCAGGGAAAGGGTGGAAGCCTAGTTTGGATACTATTAAGGAGAAGAGTATTGAGAAAAAACATAGTCATTGGTTGTTTCTCAAGAGTTTTTAG 582 0.4192 MGNQISFRPSDSRGKVVFLDGSVHEFDEQITAAELMMDHPQKVVVEFHSAVNQKRPAPLPADKKLEMNKIYLMLPVKQGKAVGLSGEETRRVLLMVNSVLHSNYVLCSSKFLPWFSSFCHSSEIVEPRRKEEVEEEEKGVRCGFSENLPEILEGRPDYLNRQISGKGWKPSLDTIKEKSIEKKHSHWLFLKSF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05362 193 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 11 177 - -
Vivi1g05362 193 Pfam PADRE domain 1 177 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05362 Vivi-Chr1 117356154 117357141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05362 - - gmx:100784884 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05362 1 117356154 117357141 Vivi1g05362 1 117356154 117357141 ECH
Vivi6g04607 6 148151388 148152337 Vivi1g05362 1 117356154 117357141 PCT