Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05347 ATGGAGACAAAGGTTGAAAACGCAATCATTAACTTTAATCCAAACACAACCCTTGATGAAAAACCTCAACCAAAAGCCATCATCAAGAACAAACGATCAAAGAATTTCTTTAAGGTTGCACTCTTCATGATGCGAGGGCATTCTCGTAAATCATCGAAAGCGATTCTCCCGGTTGACGACGAGTCGAGAAGCATATGGAGGAAGCTTGTTGGGTCCATGAGACCTATGCATCTTCAAAGCAATAAATCTCCACCGCAAATTCTCAACGGTCAGAGTAATCTTAAACATGTGAAAGTGGTAGTTGAAACTGCTAATGATCATGAAGGGGAGGAGGATAGGTTTCATCTTGCGTATTCGCCGTCTCCAGCGAGTAGCCGACACGCATCGGCGGCTAGTAGCCGATACGCTTCGGCGGTGGGACTTAATGAAATGGTTGAGGAGGAGAAAGAGGAAGAGATTGTGAATAGGGGTAGTGAGAATTATGGGGATGATGGTGATGACATGATTGATGCAAAAGCTGATGAGTTTATCGCTCATTTTTATCAAGAAATGAGGTTGCAGCGTATGGATGTTGTGGACCATCGTTACAATGAGTTAAGTATGAGGTCATTAGGCTTATGA 621 0.4332 METKVENAIINFNPNTTLDEKPQPKAIIKNKRSKNFFKVALFMMRGHSRKSSKAILPVDDESRSIWRKLVGSMRPMHLQSNKSPPQILNGQSNLKHVKVVVETANDHEGEEDRFHLAYSPSPASSRHASAASSRYASAVGLNEMVEEEKEEEIVNRGSENYGDDGDDMIDAKADEFIAHFYQEMRLQRMDVVDHRYNELSMRSLGL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05347 206 Pfam Cotton fibre expressed protein 166 198 IPR008480 -
Vivi1g05347 206 PANTHER COTTON FIBER PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05347 Vivi-Chr1 116968625 116969780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05347 - - psat:127092957 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04599 6 148011150 148011991 Vivi1g05347 1 116968625 116969780 PCT