Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05237 ATGGCTGAAATTACTATGAAGAATCAACCGTCAAAGCCACACTGGTGGTGGCTTGATGAGCACACCTCCGCTAGAAGATCACCATGGCTTCAATCTACACTCACTGAGCTGAATGAGAAGACAAAGGCAATGTTGAAGTTAATTGAAGAAGATGCGGATTCCTTTGCTCAACGAGCGGAGATGTTTTACAAGAAGAGACCCGAGCTTGTGAGCATGGTTGAGGATTTCTACAAGATTCACCGTTTGTTAGCTGAGCGGTATGATCAAGTTCGGCCTGAAGCTGGAACTCGCCTGCTTCCTCCTTCTGCTTGCTTGAAGCATTCTCAATCAGAGAAGTGGACGAATTTTGATTATCGCTGTTATGATAGCTATTCTGAGAATTGTGATGTGGAGGAATCTGTGGAATCGGAAATTGATGATCCTGAGCAAGAAGGGGAAGTTCGGCCTGTGGCTCCAAATGAAGTGATGAAGTTGTTTGAAAGAGTCGGTGAAGTGAAGAAGACTGATAAGGATCAAATCAAGCAGAAAGATGACGTTCTTGATGAAGTAATGATGTTACGGGAAGAAATTGATCGACTCAGAAAAGAAAATGAAGCATATAAGAACGAACTCGCGCAGAAAAATACCACTTATAATGAAGTAGTAACAAATTTGAGGGAAGAAATTGAACAACTCAAGAAAATTAACAAAACAACGAAGGATGAAATTCAGCAGAAAAATATTACCCGCAGCGAAGTAATGAAGTTGAAGAAAGAAATAGAGCGACTCAGAAAAGAGAATGAAGCTCAAAAGGAAGAACTCAAAAAGAAAGATTCCAATAGCAATGAAGTAATGAAGTTGAGGGAAGAAATAAAGCGACTCACAAAAGAGAATGAAGCTCAAAAGGAAGAACTCGAGAAGAAAGATACCAATGGCAATGAAGTAATGGAGTTAAGGAAAGAATTAGAAAGACACAAGAAAGAGAATGAAGCTCAAAAGGAAGAACTCGAGAAGAATGATAGCATTCACAATGAAGTAATGAAATTGAGGAAAGAGTTAGAAAGACACAAGGAAGAGAAAAAAGCTCAAAATGATGAACTCAAGCATAAAGACACCATTCGCGATGAAATAAATACGCTGAAGGAAGAGAGGGAAAGTTTTAGAGAAGAGAATAGGACTCACAAGGATGATCTCAAACGGAAAGACAGTGAGAAAATAGAGGTGATAAGACAACTGAGTTCAACAATAGATTTGCTGAAACAGGAGAACATAGAGATGAAAAACTTCATAGCTAAGGAATCCGTGAAGAAATGGAAGACACCATTTGAGTTCGATAAACTAATCGAAACATTCTCAGTGAAGTTGTTTAAGGGGGGTCCTAGGAGGAATAAGCCAAGTGTTGTAGCTCTCTAG 1392 0.393 MAEITMKNQPSKPHWWWLDEHTSARRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMFYKKRPELVSMVEDFYKIHRLLAERYDQVRPEAGTRLLPPSACLKHSQSEKWTNFDYRCYDSYSENCDVEESVESEIDDPEQEGEVRPVAPNEVMKLFERVGEVKKTDKDQIKQKDDVLDEVMMLREEIDRLRKENEAYKNELAQKNTTYNEVVTNLREEIEQLKKINKTTKDEIQQKNITRSEVMKLKKEIERLRKENEAQKEELKKKDSNSNEVMKLREEIKRLTKENEAQKEELEKKDTNGNEVMELRKELERHKKENEAQKEELEKNDSIHNEVMKLRKELERHKEEKKAQNDELKHKDTIRDEINTLKEERESFREENRTHKDDLKRKDSEKIEVIRQLSSTIDLLKQENIEMKNFIAKESVKKWKTPFEFDKLIETFSVKLFKGGPRRNKPSVVAL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05237 463 Coils Coil 176 390 - -
Vivi1g05237 463 PANTHER PROTEIN NETWORKED 4A 1 444 - -
Vivi1g05237 463 MobiDBLite consensus disorder prediction 256 396 - -
Vivi1g05237 463 Pfam KIP1-like protein 15 88 IPR011684 GO:0003779
Vivi1g05237 463 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 94 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05237 Vivi-Chr1 113900390 113902662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05237 - - psat:127093222 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05237 1 113900390 113902662 Vivi1g05237 1 113900390 113902662 ECH
Vivi6g05493 6 160572884 160575213 Vivi1g05237 1 113900390 113902662 PCT