Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04680 ATGGCTGATTCAGATGAAAACCCTAATCAACAAGAAAACTCCATAATTCCAGTGTTAACAGTTTTCAAGAACAAATCCATCATCAAGAACATCTGCATCGTTCTCAACAACAACGATGACACCGATCACATCATTCTCATCGGTCGACACCCAACCTGCAACATTGTTCTCACTCACCCTAGCATCAGCCGCTTCCACCTTCAGATTCGCTTCACTCCCTCTTCCAAATCCATTTCCCTCCTCGATATATCTTCTGTGCACGGAACGTGGGTGAGTGGTAGAAAGCTCGAGCATGGCGTGAGTGTTGAGTTGAAGGGAGGTGATAGCTTTCGACTTGGGGTTTCCAGTAGGGTTTACCTTCTTCGCTTTGTCTCCCAATTTGATGCAAATGCATTAAAGAACATTGGTTCTTTATGTTTTGATGATGATGAAATTAAGAGTCAGTTAGAAACATTTGATGATGAGAATGACTCCGTTAGAACTGAGACATCATGTTGTGATGGTGAAGATGAACTGGGTGAATCTCAAATCTGTTATCTGTCTCCACCTTATGTACAATCAGTGGATAAAGCAGAAAATAGAGAACAAATAATTGAAGCTTGTCCCGAAGTAGAGGCGACAGGAGAGACTAATTTGCTTTGCACATGGAAGGAATGTTTTAAACACACCTTATGTAATCCAGTTGTGGAAGCAAACAAATTGCACCAACAATCTTCTGCAGAAAAGAAGTCGATTGACCCTGAAGCATCACTTAATGAAATAGTTAGTGCTGCAGTGGATGTGAAACCTAAGGAATCTGATTTTGATGGTGCATTCAAAGATAGTGACAAGATTGAAGATGTTTTAACTACAAGAGCAAACATCTTCAATTCTGAGGACATGCCTGATTCTGAATCTCATCAGACCAATACTGATGGGGAGGTTTCCGTTGAATCACTCTCTGATGGGGAAGGGTACTCACTGAATGAAATAGTTAAAAATATGGACCCTTCATCGTCTGATGAAAATGGTGTTGCTGCTGTGAATGTAAAACCTAGAGAACACAAAATAGAATTCTTCTTTGAAGAAAATGCCAGTATTGACAATATTTTAACTAGTGTAGCTAGTCTTTTCGTTTCTGAAAACAGGTCTTCACTAGTTGAGGAAGCAAATCCTGTAACCAATCTTCAACAAAACAAGATTGTTGAAGAAGTTAATGTTGATTCACTATCTGATGGAGAAAAGGAAAATAAGTGTGACAAAGTGTTGCAGGCATACCAGAATTTTAAACCTTGTGATGAAGAATGTAATTCACTGGATGAAACAGTTGAAGATACTGGGAAATCCTATCAAACAGAGTCACTTAATCCTTCAGTAGCTCAGGAGGCTGATTTAGATATTACATACAAAGAGAATCAAGCCCCACAATCTCTCGTTGCTGTGGCTGGATGCTTTGATTTGGAAAGCCATGAAAGCTGTGTAGAAGACTTAGCAGAGAGAAGTTCAACCTTTGCTTGTGATAAGGCTATGAGTGCGCCTCAGAATCAAACCAGGAAGAGCAGATTGTTGAACACACCTAATGTTGACACTAAATTTGTAACGAGTAATTTGAGGGATATCAGTGTCATAAATAAACCAATGCGAACGGATCTCTTCTCTGTCTTGGATGAAGAGGAAATGTTCACTCCAAATAAGGAAAACCTAGAAGATAGTAAAAGTTCCAAGTCACAGATATCAAAGAATTTGTTGAAGGCTAGTCCCAACTTCTATTCCGCTGAAAGAAGTACCTCTTCAAATAAAGAGAACCTGACTCCAAGAGAAGCCCAACAATGGCAGTCAGGGAGAAAGCCTCTTGAGTGTCATGATACTGCGGGGTTAAGAAAAAAGAGAATGGAGCGGACACCCTTAAAGTCACTGATGAATTCTGGAGGCAATCACAATTCGGCAAACTCAAGTCCTTTTTATAGTCCTTTTTCTGCTGCAAAAGAAAACCTGACTCCAATAGAAGCCCAACAATGGCAGTCAGAGAAAAAGCCTCTTGATTGTCATGATACTGCGGGATTAAGTAAAAAGAGAGTGGAGCGGACACCCTTACAGTCATTAATGAGTTCTGGACGCAATCACAACTCGGCAAACTCAAGTTCTTTTTATAGTCCTTTTTCTGCTGCAAAAGAGATACCCTTACAGTCACTAGGGAGTTCGGGAGGCAATTTCATTTCAGCAAACTCAAGTTCTTTTAGTAGTCCATTTTCTGCTGCAAAATCCATTCTTGGGGTCACTGCGAGAACCAGTAATTCGAGACATATTTCAGACAAGCAAAGTGAACCTTCTCCTATTAATGAAGAACGAAAGAGAAGCTGGGATATGGTTGTAGACACTGCTTCACTTCTGAACAAAGAGTCAAGAAAGGCTTTGCAGCTTCTACAAGGTCTCAAGGGGACTCGCTTAATCATTCCACAATCAGTCATAAGAGAATTGGGCAGCTTGAAGCAACATATCGGAGTTTTTAGAAGGATTCCAGAGGCTACTTTGGCCTTGGAATGGATTGAAGAATGCTTAGGAAAGACAAAGTGGTGGATTCACATCCTTGACTGTGTTTTTCCTATTGTTGAAGAACATATCCTTGACTGTGCTCTTCAATATAGAAAAAAAGATGATGCTGGACAACTTGTCCTTCTTAGTGATGATATCAACTTGAAAATCAAATCCATGGCAAAGGGACTGCCATGTGAGACAGCGGAGCAATTTCGTCGGAGTTTAGTGAACCCTTTCTCTGAGAGGTTTATGTGGGCTAACAGCTCTCCTAGGGGACTGACTTGGTCTTGCCAAGATGATGTGGTTTTAAGGGAGAAATATTGCTGTTTCCCATCAAAGGCTGGTCTGAAGCTGCTTGTCACTTAA 2880 0.4059 MADSDENPNQQENSIIPVLTVFKNKSIIKNICIVLNNNDDTDHIILIGRHPTCNIVLTHPSISRFHLQIRFTPSSKSISLLDISSVHGTWVSGRKLEHGVSVELKGGDSFRLGVSSRVYLLRFVSQFDANALKNIGSLCFDDDEIKSQLETFDDENDSVRTETSCCDGEDELGESQICYLSPPYVQSVDKAENREQIIEACPEVEATGETNLLCTWKECFKHTLCNPVVEANKLHQQSSAEKKSIDPEASLNEIVSAAVDVKPKESDFDGAFKDSDKIEDVLTTRANIFNSEDMPDSESHQTNTDGEVSVESLSDGEGYSLNEIVKNMDPSSSDENGVAAVNVKPREHKIEFFFEENASIDNILTSVASLFVSENRSSLVEEANPVTNLQQNKIVEEVNVDSLSDGEKENKCDKVLQAYQNFKPCDEECNSLDETVEDTGKSYQTESLNPSVAQEADLDITYKENQAPQSLVAVAGCFDLESHESCVEDLAERSSTFACDKAMSAPQNQTRKSRLLNTPNVDTKFVTSNLRDISVINKPMRTDLFSVLDEEEMFTPNKENLEDSKSSKSQISKNLLKASPNFYSAERSTSSNKENLTPREAQQWQSGRKPLECHDTAGLRKKRMERTPLKSLMNSGGNHNSANSSPFYSPFSAAKENLTPIEAQQWQSEKKPLDCHDTAGLSKKRVERTPLQSLMSSGRNHNSANSSSFYSPFSAAKEIPLQSLGSSGGNFISANSSSFSSPFSAAKSILGVTARTSNSRHISDKQSEPSPINEERKRSWDMVVDTASLLNKESRKALQLLQGLKGTRLIIPQSVIRELGSLKQHIGVFRRIPEATLALEWIEECLGKTKWWIHILDCVFPIVEEHILDCALQYRKKDDAGQLVLLSDDINLKIKSMAKGLPCETAEQFRRSLVNPFSERFMWANSSPRGLTWSCQDDVVLREKYCCFPSKAGLKLLVT 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04680 959 Gene3D - 777 913 - -
Vivi1g04680 959 MobiDBLite consensus disorder prediction 578 647 - -
Vivi1g04680 959 SUPERFAMILY PIN domain-like 783 914 IPR029060 -
Vivi1g04680 959 MobiDBLite consensus disorder prediction 291 313 - -
Vivi1g04680 959 Pfam PIN domain 782 906 IPR002716 -
Vivi1g04680 959 MobiDBLite consensus disorder prediction 631 647 - -
Vivi1g04680 959 MobiDBLite consensus disorder prediction 613 628 - -
Vivi1g04680 959 ProSiteProfiles Forkhead-associated (FHA) domain profile. 45 96 IPR000253 GO:0005515
Vivi1g04680 959 SMART FHA_2 44 96 IPR000253 GO:0005515
Vivi1g04680 959 MobiDBLite consensus disorder prediction 578 604 - -
Vivi1g04680 959 Pfam FHA domain 46 113 IPR000253 GO:0005515
Vivi1g04680 959 PANTHER TRANSMEMBRANE PROTEIN 18 651 958 - -
Vivi1g04680 959 MobiDBLite consensus disorder prediction 757 777 - -
Vivi1g04680 959 SUPERFAMILY SMAD/FHA domain 40 128 IPR008984 GO:0005515
Vivi1g04680 959 Gene3D - 2 125 - -
Vivi1g04680 959 MobiDBLite consensus disorder prediction 291 310 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04680 - - vvo:131643702 1858.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04680 1 100043281 100047349 Vivi1g04680 1 100043281 100047349 ECH