Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04676 ATGAAGATGAGTGTTTCCACCTTCACTCATCTATCTTACTCTTCTCCTTCTATTTCCTCTATCCTCCCATCCAAATCCACCCTTATCTCCAATCACTTCCCTTCCAAACTCCCCACTTCATCACCATGCTCTCTCAAAAAGATCAAAGCTTTGGAAATTCAGCAAACAAGTTCTAAACTTGATGCACTCAAGAGTAGGATTCTGCTCCAGATGTTTCAAAGGGCAATGCCAATGGAACCCCTTGTAGCCATTTTCGGACAACAATCCGACATGAATGACTTTACATTGGAAAATCTTCAAGATAGGAAAAAGTCGTCCAAATGGGTTGCAGCATTCTTGTTTGGACAAACTATATCAGTTGTTTCTCCCGATGTTTCATACGCAAGCAACTCAGTAAAGATAAATGAGATGTATCAGGTTGGGGAGTTGTTTGACTTAGGAATCCAATTAATATACTTGCTATTGTTGTTGGGTTTGCTCGGTGCTGGAACTTACTATGTCATTCGCCAAGTTCTTGTTCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAGGAGCAAGTCAGAAGTGGTGATGCAAATGCGACTGAGCTGTTTGAACTTGGCGCAGTGATGCTGCGGAGGAAATTTTACCCAGCTGCTACCAAGTTCTTGCTTCAAGCAATTGATAAATGGGATGGAGAAAATCAGGATCTTGCCCAGGTTTACAATGCGCTTGGTGTCAGTTATGTTCGTGACGGGAAGCTTGAGAAAGGAATTGCTCAGTTTGAGACAGCTGTGAAGATTCAACCGGGCTATGTCACAGCATGGAACAATCTCGGTGATGCTTTAGAGAGTAAAAAAGAATATGTGTCGGCTCTGAAGGCTTTTGAAGAAGTTCTTCTATTTGATCCTAACAACAAGATTGCGCGGCCCCGGAGAGATGGTTTAAAGGAACTTGTTGGAATGTCCGAAGGAGTTACTGTCAGATATAGAGAGAAGAAATGA 987 0.4255 MKMSVSTFTHLSYSSPSISSILPSKSTLISNHFPSKLPTSSPCSLKKIKALEIQQTSSKLDALKSRILLQMFQRAMPMEPLVAIFGQQSDMNDFTLENLQDRKKSSKWVAAFLFGQTISVVSPDVSYASNSVKINEMYQVGELFDLGIQLIYLLLLLGLLGAGTYYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGENQDLAQVYNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDALESKKEYVSALKAFEEVLLFDPNNKIARPRRDGLKELVGMSEGVTVRYREKK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04676 328 SUPERFAMILY TPR-like 191 304 IPR011990 GO:0005515
Vivi1g04676 328 Gene3D Tetratricopeptide repeat domain 170 314 IPR011990 GO:0005515
Vivi1g04676 328 ProSiteProfiles TPR repeat profile. 267 300 IPR019734 GO:0005515
Vivi1g04676 328 ProSiteProfiles TPR repeat profile. 233 266 IPR019734 GO:0005515
Vivi1g04676 328 Pfam Tetratricopeptide repeat 238 297 - -
Vivi1g04676 328 SMART tpr_5 233 266 IPR019734 GO:0005515
Vivi1g04676 328 SMART tpr_5 267 300 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04676 - - psat:127098590 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04676 1 99958850 99961202 Vivi1g04676 1 99958850 99961202 ECH