Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04665 ATGGGCGACAAAAGAAAAAAGCACCGTCATCAACACGATACAACCTCTCCTTCTTCATCCTCTCCCTCCACCGACTCCGATTCAGACTCCGACCGCTCTTCCAAGCGCCGCCGTCGCCACCGCCGTGAAAAAGAGCGACGCAGAAGGAGCGATGGAAGCTCCAAACGCGAAAGGGAGAGTAAGAGAAAGGAAAAGAGAAAAAAGAGAGACAGAGAGAGGAGAAAGTCCAAACGGCATCACTATTCCGATGACGAATCCCAATCTTCTTCCGACGAGGAATTTCCACCCAGGATTCAGCCCCAAATAGCACTCCGTGAAATGATGACCGAGTTTCCCAACGTTGGCAACGATTTGAAGCAGTTATTGCAAATGATTGATAACGGGCAAGCTGTGGATATAAAGGATATATCAGAAAAGTCTCTAGTGAAGCATTTGAAGAATCTCTTCCTTTCCTTAAATCTAAAGGAAAATGGGGATAGAGTTTTTTTACTGCCTTCTAAAGCTCCCCCTACTTTAGATGTTGTTGGCCCTCTGATTCAATCTTTTATGCATCCCGCGAATGATCGAGATGATCCTTCAGCTGCATTGCCTGAAACATGTTTGGCTCCGACAGAACAGATGGAAGACGACTGTACAACTAAACCTCCTGAGGATCATTCTGTTGGTCCTAAAAAAAGAGTTATTGGCCCTGCAATGCCATCTGCTGAATTACTTGCTGCTGCTGCCAAATTAACAGAGGCACAGACCGCGTTCATAGAAGCTGAATTAGATGACGATACTGAACTCTTTGTGGGACCTCCACCTCCTGCTATGGTTTCTGAAGCAGAATCAGCTAATGAGGCAGAACGTTTTGAGGAGGTTACCAGGATAATGGACGTTGAGATTGACAGCCCATACGATGTTCTAGGAGTTAACCATAATATGTCTGATGGTAACATAAAGAAAAAGTACTGGAAGATATCACTATTAGTTCATCCAGATAAATGTTCTCACCCACAAGCCAATCAAGCATTTATCAAACTAAATAAGGCTTTCAAAGAGTTACAAGATCCCGAAAAGCGGAAAGCAATGGATGATAAAATCAAACTCAAGCAAGAACAGGAGGACTTCAAGGCTGAGCTTAAAGTCATGCGAGAGACTGCACTGTGGAGAAGATCCCAAGGAATATCAATGGAAGGTGATGACGAGCTTCTGGCACAGACGGAGGTTAAAGTGGAACCCAAAAGAGATGAATGGATGACAACACTGCCACCGGAGAGAAAGCCTGGTGGTGTGACTATGCAATCAACCCAATTTAGCCGGGAGACAAAGCAAGGTAGAGGAGACACTAGTATTTGGACAGACACGCCTACTGACAGAGCTCAGAAAGCAAAGATGAATTATTTAGAAGCATACAATCAGGCCACTGCATTAGCCTCAAACGAAGAAGAAAAGAAAAGGGCTAATACAGATGCAGATTTGGTGGACAAATACAACAAAGCAAAAAGATCAAAAACATTGGTGCAAAAACATCAAGAAGAGGTTGCTAGCAAATCCAAGAAAAAATCCAAGCAACAGAAGGAGAAGGGAGAGAAAGAATGGGTGGGTCAACATCCATGGAAGCCATGGGATCGTGAAAATGATCTAGCAGCTGGGAGGATGAAAGTAAAACTTGATGCTGAAGGCATGTCTGAGGGGTTATCTTCAAGGTTTAATTCTGGAAACTTTCAAAGGAACTTCCTTTGA 1725 0.4388 MGDKRKKHRHQHDTTSPSSSSPSTDSDSDSDRSSKRRRRHRREKERRRRSDGSSKRERESKRKEKRKKRDRERRKSKRHHYSDDESQSSSDEEFPPRIQPQIALREMMTEFPNVGNDLKQLLQMIDNGQAVDIKDISEKSLVKHLKNLFLSLNLKENGDRVFLLPSKAPPTLDVVGPLIQSFMHPANDRDDPSAALPETCLAPTEQMEDDCTTKPPEDHSVGPKKRVIGPAMPSAELLAAAAKLTEAQTAFIEAELDDDTELFVGPPPPAMVSEAESANEAERFEEVTRIMDVEIDSPYDVLGVNHNMSDGNIKKKYWKISLLVHPDKCSHPQANQAFIKLNKAFKELQDPEKRKAMDDKIKLKQEQEDFKAELKVMRETALWRRSQGISMEGDDELLAQTEVKVEPKRDEWMTTLPPERKPGGVTMQSTQFSRETKQGRGDTSIWTDTPTDRAQKAKMNYLEAYNQATALASNEEEKKRANTDADLVDKYNKAKRSKTLVQKHQEEVASKSKKKSKQQKEKGEKEWVGQHPWKPWDRENDLAAGRMKVKLDAEGMSEGLSSRFNSGNFQRNFL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04665 574 Gene3D DnaJ domain 281 381 IPR036869 -
Vivi1g04665 574 MobiDBLite consensus disorder prediction 77 91 - -
Vivi1g04665 574 MobiDBLite consensus disorder prediction 473 540 - -
Vivi1g04665 574 MobiDBLite consensus disorder prediction 1 96 - -
Vivi1g04665 574 PRINTS DnaJ domain signature 317 332 IPR001623 -
Vivi1g04665 574 PRINTS DnaJ domain signature 333 353 IPR001623 -
Vivi1g04665 574 PRINTS DnaJ domain signature 299 317 IPR001623 -
Vivi1g04665 574 Coils Coil 353 380 - -
Vivi1g04665 574 SUPERFAMILY Chaperone J-domain 270 355 IPR036869 -
Vivi1g04665 574 Coils Coil 501 521 - -
Vivi1g04665 574 CDD DnaJ 298 350 IPR001623 -
Vivi1g04665 574 MobiDBLite consensus disorder prediction 413 449 - -
Vivi1g04665 574 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 5 574 - -
Vivi1g04665 574 ProSiteProfiles dnaJ domain profile. 297 362 IPR001623 -
Vivi1g04665 574 MobiDBLite consensus disorder prediction 60 76 - -
Vivi1g04665 574 Pfam Protein of unknown function (DUF3752) 417 564 IPR022226 -
Vivi1g04665 574 SMART dnaj_3 296 353 IPR001623 -
Vivi1g04665 574 MobiDBLite consensus disorder prediction 424 449 - -
Vivi1g04665 574 Pfam DnaJ domain 298 358 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04665 Vivi-Chr1 99835117 99844106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04665 263 362 Miscellaneous Gene Families AT5G49580 32.039 5.09e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04665 - - gmx:100788598 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04665 1 99835117 99844106 Vivi1g04665 1 99835117 99844106 ECH