Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04648 ATGAAGATTTGGCTTGTTTTCTCTCTTGTGCTATTGATCCACTCTTGCCGTGCCGCCGAACCCTTAACTGTCGATGGAAAAGTGTTGATTCTCGACGAATCCAACTTCGATTCCGCCATTTCATCCTTCGATCACATCCTGGTTGATTTCTACGCTCCCTGGTGTGGCCACTGCAAGCGTCTCTCTCCCGAGTTAGATGCAGCTGCGCCTGTACTTGCAAACTTGAAGGAACCCATACTCATAGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCAAGAAAACATGATGTTGATGCCTATCCAACCATTTTGATGTTTAATCACGGCGTCCCTACAGAATACCGTGGACCGAGGAAAGCTGATTTGCTTGTTCGTTATCTTAAGAAATTTGCTGCTTCTGATGTTTCTGTTCTCGACTCAGATTCTGCTGTGAATAGTTTTGTTGAAGAAGCTGGCACTTTTTTCCCGGTTTTTATTGGTTTTGGGTTGGACAGTTCGGTTATAGAAAAGTTGGGCATAAAGTATAAGAAAAATGCATGGTTTTCTGTCGCAAAGGATTTTTCAGAGGATCTCATGATAACATATGACTTTGATAAGATTCCTGCTTTAGTTTCCCTCAATCAACAGTACAATGAGCGGAACACATTTTATGGCCCATTTGAAGATGATTTTTTGGAAGACTTTGTAAAACAAAATCTCATTCCTTTGGTTGTGCCTGTATCCTATGAAACACTAAAGTTGATAAAAGCTGATGGAAGGAAAATAGTTTTGACTATTGTGGAGGATGAAAATGAAGAAAGATCAAAAGAACTGGTTAAGTTATTGAGGGGTGCTGCATCTGCAAACCGTGACTTAATATTTGGTTATGTTGGCGTTAAACAGCTTGATGAATTTGCTGATAAATTCGATACCAGTTCTAAACTACCAAAAATGGTCGTTTGGGATAAAGAAGATGATTATCTTTCAGTTGTTGGTTCAGAAAACATCGAGGAAGAGGATCAAGGAACTCAAATCACTAAATTTCTAGAAGGATACAGAGAAGGAAGAACCATAAAGAAAACACTTAGCGGGCCAACATTCATGCAATTTCTCCATAGATCTTTTGACATTAGAATGGTGTACATAGTTGTTTTTATGATTGCAGTGCTAATGCTGATTCAAACCTTAGGCAAAGGAGGTGACAGTGGTGAATATCAGAGAGTAGCAAACCAAGATAAGGTGGATCAACCAAGCAGCTCAACAACAGAAGGTGAAAGTAAAGAGTATAAAGAAGGTGACAAAGAAGACTAA 1293 0.3968 MKIWLVFSLVLLIHSCRAAEPLTVDGKVLILDESNFDSAISSFDHILVDFYAPWCGHCKRLSPELDAAAPVLANLKEPILIAKVDADKHTRLARKHDVDAYPTILMFNHGVPTEYRGPRKADLLVRYLKKFAASDVSVLDSDSAVNSFVEEAGTFFPVFIGFGLDSSVIEKLGIKYKKNAWFSVAKDFSEDLMITYDFDKIPALVSLNQQYNERNTFYGPFEDDFLEDFVKQNLIPLVVPVSYETLKLIKADGRKIVLTIVEDENEERSKELVKLLRGAASANRDLIFGYVGVKQLDEFADKFDTSSKLPKMVVWDKEDDYLSVVGSENIEEEDQGTQITKFLEGYREGRTIKKTLSGPTFMQFLHRSFDIRMVYIVVFMIAVLMLIQTLGKGGDSGEYQRVANQDKVDQPSSSTTEGESKEYKEGDKED 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04648 430 Pfam Thioredoxin-like domain 188 332 - -
Vivi1g04648 430 CDD PDI_a_family 29 128 - -
Vivi1g04648 430 MobiDBLite consensus disorder prediction 403 417 - -
Vivi1g04648 430 PRINTS Thioredoxin family signature 97 108 - -
Vivi1g04648 430 PRINTS Thioredoxin family signature 46 54 - -
Vivi1g04648 430 PRINTS Thioredoxin family signature 54 63 - -
Vivi1g04648 430 FunFam Protein disulfide-isomerase 5-2 16 132 - -
Vivi1g04648 430 MobiDBLite consensus disorder prediction 398 430 - -
Vivi1g04648 430 SUPERFAMILY Thioredoxin-like 233 359 IPR036249 -
Vivi1g04648 430 SUPERFAMILY Thioredoxin-like 21 131 IPR036249 -
Vivi1g04648 430 ProSiteProfiles Thioredoxin domain profile. 10 133 IPR013766 -
Vivi1g04648 430 PANTHER PROTEIN DISULFIDE ISOMERASE 10 354 - -
Vivi1g04648 430 ProSitePatterns Thioredoxin family active site. 47 65 IPR017937 -
Vivi1g04648 430 Gene3D Glutaredoxin 223 360 - -
Vivi1g04648 430 Gene3D Glutaredoxin 18 142 - -
Vivi1g04648 430 Pfam Thioredoxin 28 130 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04648 Vivi-Chr1 99196352 99200935 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04648 K09580 - gmx:100791778 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04648 1 99196352 99200935 Vivi1g04648 1 99196352 99200935 ECH