Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04530 ATGGAGGTTGAGTTGGGTCTCAAGATCACAAGAACAAAAGATGACAGCACTACCATTTCAGATTTTCAGTTTGCCAAAGATAAAGCAGGTCCTGTTTTCTTCTCTAAAGAAACCGATTCAATTTTCACCCTCACAGCACATCTCAAAGGTTATAAGAAAGAGAACATTGACATCAGTATTAACAAAGACGGTACAAAGATTTCAGTGAGTGGTGAAAAGGAGGTGCAAGAAATGCAAATGATACCATTCAAGAAAGAGGTGAAAATAAAAGGGTTTAGAAAGAAGTTTGAGATCCCTAATGGAGTTATTTTGGATAAGATCAAGGCTAAGTATAACGAAGATGAGGGACTGTTGACAATAGTGATGCCGAAAATTGCAAAAGGTGTATCATGTGGGGTGGGAATAGAAGAAGTAAAGGAAGACGAGGGTGCAAATAGCATTGTATCAGAACCAGAACCGGAGCAAATTGTAGCAGAAGAAGAAAAGGTTTTAGAGCATAAGAGTGAAGAGGAAAATGCTCCAGTGAAGAAGAGACGTTCTAAAAAACCATGGCAACCTTGTCCTCCTTTGGTTTTTGGAGGATCAACTTTGCTTGCATCTATTATCTTTCTTGTATGGCACTATATAAGAGTGAGAAAGAGTTGA 645 0.3845 MEVELGLKITRTKDDSTTISDFQFAKDKAGPVFFSKETDSIFTLTAHLKGYKKENIDISINKDGTKISVSGEKEVQEMQMIPFKKEVKIKGFRKKFEIPNGVILDKIKAKYNEDEGLLTIVMPKIAKGVSCGVGIEEVKEDEGANSIVSEPEPEQIVAEEEKVLEHKSEEENAPVKKRRSKKPWQPCPPLVFGGSTLLASIIFLVWHYIRVRKS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04530 214 Gene3D - 9 130 IPR008978 -
Vivi1g04530 214 PANTHER HEAT SHOCK PROTEIN 26 1 177 - -
Vivi1g04530 214 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 141 IPR002068 -
Vivi1g04530 214 Pfam Hsp20/alpha crystallin family 36 126 IPR002068 -
Vivi1g04530 214 SUPERFAMILY HSP20-like chaperones 32 127 IPR008978 -
Vivi1g04530 214 MobiDBLite consensus disorder prediction 163 183 - -
Vivi1g04530 214 MobiDBLite consensus disorder prediction 163 178 - -
Vivi1g04530 214 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04530 Vivi-Chr1 97002025 97002855 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04530 - - aprc:113873754 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05246 2 175723107 175732694 Vivi1g04530 1 97002025 97002855 PCT