Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04529 ATGCCAGCGACGGACTATCAGAGTTCGTCTCCTTCATCGTTAACGCAGTTCGGTCGTTCAATTCTAAGCTTTCGTCGTGAACAGGTTCATTCAATGGAGGGGTCAACGTTAGAGATTGAACTCGATGCTTTTCAAGTGCATGTTACTGATCGATTTCTTGATCTATCTTCTGTTGGTCAGGATGATTTGCTTTCATTGAAATGGATTGGGAAGCTTCTGGATTGTTTTCTGGTTTGTCAGGAGGAGTTTAAGGCTATCCTGTATAGCCATAAGGTACAGGCGTCGAGATCGCCGTTGGATCGAATGGTGTCGGATTATTTTGAGCGGAGTGTTAAGGCTTTGGATGTTTGTAATGCGATTCGGGATGGGGTGGAGCAGATTCGGCTTTGGCAGAAGCTGTTGGAGATTGTTCTTTATGCGTTGGATCATGATAGGAGTATCGGTGAAGGGCACTTTCGGAGAGCGAAGAAGGCGCTGATTGATTTGTCGATTAGTATGCTCGATGATAATAAGGATTCTAGTGGGTCGGTTGCGCAGAGGAATCGATCTTTCGGGAGGAACAATGGTAGAGATAAAGATCATAGCCATGGGAATAGTCATGGGAATAACAACTATCAACATCGGTCTTTGGGGCATTTTAGGTCACTTTCATGGAGTGTTTCTCGTACTTGGTCTGCTGCTAGACAACTCCAAGCAATTGGGAATAATATTAATCCTCCGAAAGCGAATGATCTTATTGCGACTAACGGTCTTGCAATGACGGTGTATGTTATGAATTCGGTCTTGTTGTTTGTTATGTGGGCTCTTGTGGCTGCGATTCCTTGTCAAGACCGCGGATTGCAAGTGCATTTCACCATTCCAAGGAGCTACACTTGGGCTATTCCGTTGCTCGCGCTCCACGATAGGATCTTGGAGGAGTCTAAGAAGCGCGAAAGGAAGAATGCTTGTGGCTTGCTGAGAGAGATTCAACAGATTGAGAAATCTGTTAGACAGATGAGCGAATTGGCTGATTCGGCGCAGTTTCCGTTAACGGAGGAGAAGGAAACAGAAGTTAGGCAGAGAGTTCAAGAGGTGTCAAAGGTTTGTGATGCTTTGAAAGATGGACTCGATCCGTTGGAGCGCCAAGTGAGGGAAGTTTTCCATAGAATTGTGCGGAGCCGAACCGAAGGGCTTGACTCTCTTGGTAGTAGGCCAAACAATGCTGAATAA 1209 0.4574 MPATDYQSSSPSSLTQFGRSILSFRREQVHSMEGSTLEIELDAFQVHVTDRFLDLSSVGQDDLLSLKWIGKLLDCFLVCQEEFKAILYSHKVQASRSPLDRMVSDYFERSVKALDVCNAIRDGVEQIRLWQKLLEIVLYALDHDRSIGEGHFRRAKKALIDLSISMLDDNKDSSGSVAQRNRSFGRNNGRDKDHSHGNSHGNNNYQHRSLGHFRSLSWSVSRTWSAARQLQAIGNNINPPKANDLIATNGLAMTVYVMNSVLLFVMWALVAAIPCQDRGLQVHFTIPRSYTWAIPLLALHDRILEESKKRERKNACGLLREIQQIEKSVRQMSELADSAQFPLTEEKETEVRQRVQEVSKVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGSRPNNAE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04529 402 PANTHER BPS1-LIKE PROTEIN 17 394 - -
Vivi1g04529 402 MobiDBLite consensus disorder prediction 170 184 - -
Vivi1g04529 402 Pfam Protein ROH1-like 15 394 IPR008511 -
Vivi1g04529 402 MobiDBLite consensus disorder prediction 170 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04529 Vivi-Chr1 96980290 96982517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04529 - - ccaj:109812538 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05244 2 175721338 175722908 Vivi1g04529 1 96980290 96982517 PCT