Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04478 ATGGACACAGATGGGTTATCCCAAATCTGCAGCGGCCTCGGAGCCATCGAAGAAGACGACGAGGGAAACCGAATCGGTTACTCCAAAGGCGAATACTGTCTCGATAACCTAAAAGACTTGCTAAGGTTTTTGAGACGTGATGATCCGCAAACACGTGATGTGTTCAAGCAAGTGTGCAAATGGAATATAGTTTCTAAGGATTTGGTACCGATTATCGAGCATTACCACGAAGATCGTAGCATGCTTCTGAATGCAGTGAAGGTTTTGGTGTTCCTTACAATGCCAATTGAGCCTGGTTCCACCGATGTATCTCAGCAGTTGGAGTATTTATGGGATTTGAAGTCTGCAGTGACTAACAGTGACGTTGCTACAGTGATAGTGTCCATTTTGGAAAAACCACTTGAGAATTTGGAACTTAATAAATTCACGGAGGATGATTGGAAATTGGTACAGCTGGTGTTTACATTATTTAGAAATATACTTGCTGTTCAAGAAATCCCATTGCATCAGAAATCAGCAGGATTTGCTAGTCATTTTTTATCATTGAGAGATAGATTTCTGGAACTTTTGTTTCGGGAGAATGTGATGGATATAATCTTGGTTGTATCTCAAAACGTCGGCAGTTCTAATGTTTATATCCGTCAGGATAATTTGCTTCTATTGGAAATATTCCATTACATTTTTATGGGTCAGGAGCCAGAGTTGATTGTCCGGGGCCATTCGAATGGATTGAAGGTTGAAGAAGACTCCCAAGCTTCTCTTGATAGTCTCCAGTCCATCATGGAGGAAGAAAAGAAGAAAAGAATTATTAATAGGCTTGGCAATATAAGCCGGCATTCACAATTCAGTGGAACATTTGCACGGGTTACCATGGATGGTTCTAAAGCCGTGTTTAAGGGGAATCCTAATTCTTCCCGTAATATACATCTTAAATCACAAAATGTTATTCGAGGTCGAGCCAAAAAAATTGCGTGGGATCATCCAAGGTTGCCTTCAACAAAGGACAAGATCTTGGAGATGCTTAAAGGATTTGTAAATCAGTTTCTTTCTGGGGGATACAACGTTTTGATGCGATCGGTCCGTGAAGATATTGTCAAGGAACATCCTGCAATTCAGAAAAATGACATCATTGTTTTCTTTCAAGTGGCTGACTTTATCTCTTCATTTCAGTTTTACAAGTATTCAACTTCAAAGACAGAGGAAGAAAAGGACATATTTGGTGATAATGATGCTGAAGCTTCAGATTTCAATGGTAAAATATGTGGCCCAATTGAGGCATCGTTGAATGAGTCAATGTTCCAACTAGTTATTTCACAGTGGCGGCAGGCCTATGATGGTCTAAAGCAGACCAATGACTACAAGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTAGTACTTAACTCGTTGCCAGATGATTCTAAGGAGCCGCAAACAGCCCGCATTCTTCTGTATAAGTTATTTTATGATCAGACTGAAGAAGGGATGACTCAATTCCTCTTGAATTTGATCAAAACGTTTGACACACACAAACAATGCAAAAGTGATCTTGCAGATTTGGTTGAAATCATTTGCAAAGTTGTGAAGCTAATGGATTATCTTCAGTCTCGAGGAACATTGAGGGTGTCAAAAAAAGCTAGGAAATTGAAAAAGAAAACTTCCAATGGAACAGAATCAGGGAGTAAACCAACTGGAGACCATTCTTGTGTTAAAAAAGAAGCTGGCATTTCTATTGACAATCCATTAGGTGAAAATCATTTGCTACAGAAGGAATCCCTACCGAATGTAATCTCCAGTGACCAGGAGGGCATCCCTGACGATAATGAACATGAAAGTCTCGAGAAAGATGTGAACTCTCAAGTTCGCTTGGAATCAATGGAAAACACACATCTTGATGGTAAAGAGCATGAAAATGTCAAGGGAGATGCGAACTCCCAAGTTCGTTTGAAATCAATGGAAAACACACATCGTGATGATAATGAACATGAAAATGTCAAGGGAGATGTGAACTCCCAAGTTCGTTTGGAATCAATGGAAAACACACATCTTGATGATAATGAACATGAAAATGTCAAGGGAGATGTAAACTCCCAAGTTCGTTTGGAATCAATGGAAAACACACATCTTGATAATGAACACGATAATGTCAAGGGAGATGTGAACTTCCAAGTTGGTTTGGAATCTGTGAAAAAGACAAATCTTGATGATAATGAACACAACAATGTTGAGGAAGATGTGAACTCCCAAGTTGGTTTAGAACCAGTAGAAAACACAAATCTTGAACATCTTAATGAGGATATGTTGGATGACACTGGTGACTTTTCTGAAGATGAGCAATTAAATACAATTAGTGAAGTTGATTTCAATGTTTCAACACTTGTCTCCGCTTTTGCAAATCACAGTATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTATAAAAGCAATTCCCTTGCTATAAATCATTACATAATAAGCATGTTGCGGAGAATTAGTGATGAGCTTGAACTCCATCCCATGCTCTACCAGTTGTCGCTGCTCACAATTTTCTACGATATTCTTGCTGAACAAAAGTCATGCCCCTGCAAGGAATATGCAAGTATTGTTGATTTTCTGAATAGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAGGCAGCCCCTCCTATTTGTTGAAATTCTTTTTTGGAAGACTCGAAGGGAATGCCATTACATCAATGCAGAATATATGATGGATGAACTTAACCATTTGAGAAAAGAAAGTAAAAAGTGGAATGATAATCAAGGAGATGGAGAAATTGGTTCCTCCCCAGTGAAGGCACGGACTCATAGAAGCATTGCTGATGCACTTGGTGATGATGAAGCTGATGTCGTGATCTCTCATGACTCAAGATATCAAAACAATGGCGAAAATCTTGATGATGTTGAAGGCTTTGCTTCTACCTCGGGAAGCAAGAATGGCAGAGACGTTAACAATGGGGAGCCATGGCTGGAAGATGAATCTCAAACAGCTCCCAGAAGAAAGAAAAAACTTGTTCTAGATGCTGAATTAGAGATGCAAATTAAGAATCTCTATGAGAAATTCAAAGATGACCGAAATTGCAGTCGACTTATTGCTGAAGAGCTAGATCCAGATGGTAAAATTTCTCCAGCTCAAATATCCAATAAATTGAAAAAACTAGGGCTAACAATTGCATCAAGGAAAAAGAAGGGCGATGCTAATGAGACTCTCTCAACAAGCCCTTTAGAAGGTGCCGGAGTAGCCGGAGTTGTGAATTTAGAGGGAAGCCTGTTGGTTCAGCATCGGCAGAAAAGAAAAAGAGTCAGTGCTTTCAATGAAGATCAGGAAGCCCTTATCAAAGTTCTATTTGAGCAATTCAAGGACCATAGAAGATGTAGCTATATGATAGCCAATGCACTGGATGTTGATGGTAAATTCACACCTGCCCAAGTCTCTCGAAAACTTACGCAACTTGGCTTATATGTTCCGCAAAAGAATTCTAGAGGAAATATCCACCAAAAGAGGGAGGATCTTATGGATTATTCTAAGGATGGAATGGATGAATCTGATGATGAGACATTGGTATCATTGATAGAAAGAAAAAAAGTGAAGAATGGAAAAAAATCAAGCAAACCATTACATGAACAGACCAACGATGATAAGCTGTCAAAAGATGATTCTGATGATGAAATACTTGGCTCCATCCTCAAGAAAAAAGGGAAGAAAAGAAAAGAATCAAGCAAACAGGTCCATGAACATTCTGGTGAGGATAAATTGTCAAAAGATGATTCTGATGATGAAATACTCGGCTCTATCCTCAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACATTTACATAAAAACACCAATGTGGGTGAATTGTCTAGATATGATTCTGAAGATGAAATTCTTCAATCTGCGCTGAAGAAAAAAAAGAATGGATCTGTATCTGGTGAACTATTACATGAAAACACCAATGAGGGTGAATTGTCTAGATACGATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACTATTACATGAAAACACCAATGAAGGTGAATTGTCTAGATACGATTCCGAAGATGAGATTCTTCAATCTGCACTGAAGAAAAAAAAGAATAGATCTGTATCTGGTGAACATTTACATGAAAACACCAATGAGGGTGAATTGTCTAGATACGATTCTGAAGATGAAATTCTTCAATCTGCACTGAATGAAAATCAAGTAGGTTTTAAGAATTCCCAAGTAGAAAATAAGCAAGTGGATCCTGACTTGGAAGATTCAGAGGATGATGTGGCTGTTAATGTACTTCCTGACAATGCTGTATCAAGAAGGAAGCTGAGAATGGTGATGGATCTTGAGGATGATGAGTGA 4434 0.3848 MDTDGLSQICSGLGAIEEDDEGNRIGYSKGEYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNIVSKDLVPIIEHYHEDRSMLLNAVKVLVFLTMPIEPGSTDVSQQLEYLWDLKSAVTNSDVATVIVSILEKPLENLELNKFTEDDWKLVQLVFTLFRNILAVQEIPLHQKSAGFASHFLSLRDRFLELLFRENVMDIILVVSQNVGSSNVYIRQDNLLLLEIFHYIFMGQEPELIVRGHSNGLKVEEDSQASLDSLQSIMEEEKKKRIINRLGNISRHSQFSGTFARVTMDGSKAVFKGNPNSSRNIHLKSQNVIRGRAKKIAWDHPRLPSTKDKILEMLKGFVNQFLSGGYNVLMRSVREDIVKEHPAIQKNDIIVFFQVADFISSFQFYKYSTSKTEEEKDIFGDNDAEASDFNGKICGPIEASLNESMFQLVISQWRQAYDGLKQTNDYKFLSAAGSLLKNMIRMLDLVLNSLPDDSKEPQTARILLYKLFYDQTEEGMTQFLLNLIKTFDTHKQCKSDLADLVEIICKVVKLMDYLQSRGTLRVSKKARKLKKKTSNGTESGSKPTGDHSCVKKEAGISIDNPLGENHLLQKESLPNVISSDQEGIPDDNEHESLEKDVNSQVRLESMENTHLDGKEHENVKGDANSQVRLKSMENTHRDDNEHENVKGDVNSQVRLESMENTHLDDNEHENVKGDVNSQVRLESMENTHLDNEHDNVKGDVNFQVGLESVKKTNLDDNEHNNVEEDVNSQVGLEPVENTNLEHLNEDMLDDTGDFSEDEQLNTISEVDFNVSTLVSAFANHSIIQKLCWLLKFYKSNSLAINHYIISMLRRISDELELHPMLYQLSLLTIFYDILAEQKSCPCKEYASIVDFLNSLVRKMLKKMKRQPLLFVEILFWKTRRECHYINAEYMMDELNHLRKESKKWNDNQGDGEIGSSPVKARTHRSIADALGDDEADVVISHDSRYQNNGENLDDVEGFASTSGSKNGRDVNNGEPWLEDESQTAPRRKKKLVLDAELEMQIKNLYEKFKDDRNCSRLIAEELDPDGKISPAQISNKLKKLGLTIASRKKKGDANETLSTSPLEGAGVAGVVNLEGSLLVQHRQKRKRVSAFNEDQEALIKVLFEQFKDHRRCSYMIANALDVDGKFTPAQVSRKLTQLGLYVPQKNSRGNIHQKREDLMDYSKDGMDESDDETLVSLIERKKVKNGKKSSKPLHEQTNDDKLSKDDSDDEILGSILKKKGKKRKESSKQVHEHSGEDKLSKDDSDDEILGSILKKKKNRSVSGEHLHKNTNVGELSRYDSEDEILQSALKKKKNGSVSGELLHENTNEGELSRYDSEDEILQSALKKKKNRSVSGELLHENTNEGELSRYDSEDEILQSALKKKKNRSVSGEHLHENTNEGELSRYDSEDEILQSALNENQVGFKNSQVENKQVDPDLEDSEDDVAVNVLPDNAVSRRKLRMVMDLEDDE 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1333 1362 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1210 1243 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1254 1286 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1369 1416 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 551 577 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 973 1012 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 980 996 - -
Vivi1g04478 1477 PANTHER TIMEOUT/TIMELESS-2 2 1477 IPR044998 -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1210 1450 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 604 627 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1418 1438 - -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 1297 1316 - -
Vivi1g04478 1477 Pfam Timeless protein 27 287 IPR006906 -
Vivi1g04478 1477 MobiDBLite consensus disorder prediction 610 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04478 Vivi-Chr1 95293925 95305698 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04478 K10997 - mnt:21394741 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04478 1 95293925 95305698 Vivi1g04478 1 95293925 95305698 ECH