Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04452 ATGTTAGATTTTAAAATTGTGCTACAAGTTGAAATACATGATGACAAGACAAAGAAAAAATCCATGAAGGCGATCTCTAATATTTCAGGAGTTGAGTCAGTTTCTTTAGATATGAAGGACCAGAAATTAACCTTAACTGGAGACATGGATCCTGTGCAAGTAGTGACAAAGTTGAGGAAGTTGTGTCTTCCTAAAATATTATCTGTTGGACCAGCCAAGGAGCCTAAGAAAGAAGAGAAAAAGAAGGTTACAGAGGAGAAAAAGGATCAAAGTAAAAAGTCAGAAGCACCTGGTGTTGCCAAGATTTGTGAAGCCTATCATTATCCTATTATGATGGCACAGCCACAATACTATTACACTAGTGTGGAAGAGAATCCTAATGCATGTGTTATCTGTTAA 399 0.3659 MLDFKIVLQVEIHDDKTKKKSMKAISNISGVESVSLDMKDQKLTLTGDMDPVQVVTKLRKLCLPKILSVGPAKEPKKEEKKKVTEEKKDQSKKSEAPGVAKICEAYHYPIMMAQPQYYYTSVEENPNACVIC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04452 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 5 129 - -
Vivi1g04452 132 MobiDBLite consensus disorder prediction 71 96 - -
Vivi1g04452 132 ProSiteProfiles Heavy-metal-associated domain profile. 3 66 IPR006121 GO:0046872
Vivi1g04452 132 MobiDBLite consensus disorder prediction 71 95 - -
Vivi1g04452 132 Gene3D - 3 74 - -
Vivi1g04452 132 SUPERFAMILY HMA, heavy metal-associated domain 8 62 IPR036163 GO:0046872
Vivi1g04452 132 Pfam Heavy-metal-associated domain 8 60 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04452 Vivi-Chr1 94831660 94832688 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04452 - - cam:101510144 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04452 1 94831660 94832688 Vivi1g04452 1 94831660 94832688 ECH
Vivi2g05367 2 178519784 178524607 Vivi1g04452 1 94831660 94832688 PCT
Vivi1g04452 1 94831660 94832688 Vivi2g05368 2 178523843 178524602 PCT