Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04449 ATGATGAAAGTAGTGTTAAAGTTGGAAATAAATGAAGACAGAATCAAGCAAAAAGCTATGAAGTCAGTCTCGGGCCTTTCAGGGGTTGAGTCAGTTTCAGTGGACATGAAAGACAAGAAATTAACCTTAATAGGTGATATTGATCCAGTACGTGTAGTTGGTAAGTTAAGGAAATTTTGTCATGCTGAAATCATTTCTGTTGGACCTGCTAAAGAAGAAAAGAAAGATGAACCTAAACAGAAAGATGCTAAGAAGGATTCAACAAAAGAAAATATTGTGATTAATCCTTTCATGTTCTATGGAACACATGGCTATTATAATCATCAAATGAAGCCACAATACAATCCTTATTACGGTGCTGTTAGCGTGGAAGAGGATCCTAATAGCTGTGTTATCATCTAA 402 0.3532 MMKVVLKLEINEDRIKQKAMKSVSGLSGVESVSVDMKDKKLTLIGDIDPVRVVGKLRKFCHAEIISVGPAKEEKKDEPKQKDAKKDSTKENIVINPFMFYGTHGYYNHQMKPQYNPYYGAVSVEEDPNSCVII 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04449 133 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Vivi1g04449 133 Gene3D - 1 73 - -
Vivi1g04449 133 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 130 - -
Vivi1g04449 133 SUPERFAMILY HMA, heavy metal-associated domain 17 59 IPR036163 GO:0046872
Vivi1g04449 133 MobiDBLite consensus disorder prediction 69 89 - -
Vivi1g04449 133 Pfam Heavy-metal-associated domain 16 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04449 Vivi-Chr1 94811756 94812651 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04449 - - vvo:131612739 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04449 1 94811756 94812651 Vivi1g04449 1 94811756 94812651 ECH
Vivi2g05366 2 178519740 178520401 Vivi1g04449 1 94811756 94812651 PCT