Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04394 ATGGATTCGCTTTGGAGACTTGTGTATTTGCTAGAGCCTGCGCCGGTTACGCTTATCACGACCGCAGTAGCTGTGACATTTGGATCTGCTTTTCGAGCTCTAAATTATGGGAAAGAAATGGAGCGGAATCGGGATATGTCAGAAGCATCTATTACGTTGGATAGGTCTCAAGCATTGATGATCCCGGTTATGAGTTCTTGTAGCTTGCTTCTGATGTTCTATTTGTTCTCGTCAGTTTCGCAGCTTCTCACGGTGTTCACTTCCGTTGCTGCTGTGGCGTCCCTTTTCTTCTGCCTTTCTCCTTATGCTGCGTGTTTGAAGACACAGTTTGGTTTGGCTGATCCGTTTGTTTCGCGATGTTGTTCAAAATCTTTTACACGGATTCAAGGATTGTTATTGTTTACGTGCATTTTTACAGTGGTTGCTTGGCTTGTTTCTGGTCATTGGTTACTGAACAATTTGTTAGGGATATCTATATGCGTTGCATTTGTAAGCCATGTCCGTCTTCCAAACATCAAGATTTGTGCAATGCTTCTCGTTTGTCTGTTTGTGTACGACATTTTCTGGGTTTTCTACTCTGAAAGATTTTTTGGGGCGAATGTTATGGTATCAGTGGCAACGCAGCAAGCATCAAATCCTATGCACACAGTTGCTAATAGTTTAAGTCTTCCTGGGTTGCAATTAATAACAAAGAAATTGGAGTTACCTGTAAAGATTGTCTTTCCAAGAAACTTGCTGGGCGGTGTTGTTCCAGGGAACAGTGCATCAGAGTTCATGATGCTTGGCTTAGGAGACATGGCTATCCCAGGTATGCTCCTGGCTTTGGTCCTCTGCTTTGATTATCGCAAGAGCAGGGATACAATAAATCTCAGTGAGTTGCACTCTTCCAAAGGGCACAAATACATATGGTATGCGCTGCCTGGATATGCCATTGGTCTGGTTACTGCTTTGGCAGCTGGTGTCTTGACTCACTCACCTCAACCTGCACTCCTCTATCTGGTGCCTTCTACTTTGGGACCTGTAGTTGTGATCTCTTGGGTGAAAAATGAGTTACTCGAGTTATGGGAAGGAAACACTCAAAATCTTAATGATAAGGACCGCGAAATAGAAGTTTAG 1116 0.4355 MDSLWRLVYLLEPAPVTLITTAVAVTFGSAFRALNYGKEMERNRDMSEASITLDRSQALMIPVMSSCSLLLMFYLFSSVSQLLTVFTSVAAVASLFFCLSPYAACLKTQFGLADPFVSRCCSKSFTRIQGLLLFTCIFTVVAWLVSGHWLLNNLLGISICVAFVSHVRLPNIKICAMLLVCLFVYDIFWVFYSERFFGANVMVSVATQQASNPMHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGNSASEFMMLGLGDMAIPGMLLALVLCFDYRKSRDTINLSELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVVVISWVKNELLELWEGNTQNLNDKDREIEV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04394 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016020
Vivi1g04394 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 11 360 IPR007369 GO:0004190|GO:0016020
Vivi1g04394 371 Pfam Signal peptide peptidase 49 360 IPR007369 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04394 Vivi-Chr1 93904099 93909021 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04394 K09598 - gmx:100794976 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04394 1 93904099 93909021 Vivi1g04394 1 93904099 93909021 ECH