Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04389 ATGGCTCCACAGTGGGGAATCAAGTTCGCCGTCTACCTCATCACCAACCACTTCGGCAAAATCGTCGCTAACGTTTGTGAAAATCTACTTAACCATGGCGCTCTCACTCTGGACCTGGTTATTCGCTACACGGAACTTTCCCCGGAGCATGCTAAGAACGCATTGCTTGTGTTAATTCAACACAATTGTGTCCAGGCTTTTGTTGCAGCAGGTGGTGATGAAGATGGGTCGAGAGTTAAGACACAATACATGGTGTTGTTTGATAACATACTCCATCGACTGAGATTTCCAAAATTCATGGAGATAGTATCTGGGGAGCTTGATGACAAATGTACGAAAATTTTTGAGGGTTTGCTCCGCGATGGTAGACTTACCATGAAACAAATGGTTGACAGAGAAAGTCAAGGAAAAGAAAATGCAGCGGCTGCAGCTGCTGTACGAGAGAGCCTTCTTAAACTTCTGATGGCTCGATTTGTTGAGCGCTGCCCACTCCCTGAGGCTAGGGTAGTTGAAGAAGAAATTGTTACTAAGAAGCGTGGTGCTAAAGGGTCCCAGACTTTCAAAGCACCAGCAACAAAAGAACAACGCGTTATAGAAGCTGCAGTGCGTGGGGATATGATTAGATTTTCACTCAATGCAGATATAGGATGTAATAGTGATGGAGAAACAAATCCAGCTGATACAAGCGTTGCCGAAAATGATGCAAAAGAGGACTTAATTCTTTGGCGTGCAAATTTTGAGGAGTTCGTACGTCATCTTAGGGACAAGGCACTGATTGAGAATATAAGAACACGAGTGGATGATGGAGCTGCTATTGTCTTAAGTGCAATATTGAAGGCAACAAGAAATAAAGATAAAGAAGTGAAAATAGAAAAATCAGTTCCCTTACCGTTGGATACAATTTTCTCAGAGGTGATTAAGACTGAAAATGGCCGAACTATGACCATAGATCGTGTTAAAGGTGCTCTTGTCCAGCTGGGCTGTTCAAATCAGATGTTATATGAATATATTGTTGATTTTAAGCACATTCTTCGATGGGCTCGAAATGAAGAGGTTGAGTCAATTGTGCTAAAAAGGTATGGAAGGGATGCCTACAGAATGTTCAGGCATCTATCCAAGGAAAATCAGTTTTGCCCGACTGATAAGCTTGCAGATGCTACTCTTGTAGATAAAAAGGAAGCTTCAAAGTTACTGTATCAATTATGGAAGGAAAACTACTTGCATATGGAGAAATTATCCGTCACCGGAGCAAATACTAGACCAGTACCAATTTTAATGTGGAAAGTTAATCAGCCTCTGCTTTGGGAAAATGTTCTGGACGAGATGTACCACGGTGCCTTAAATTTGAAACTAAGAATGGCTTTTGAGCAAGAAAAGGAAGAAGAGATTATAAATACTCCTAAGGCCAAGATTAATGAGTCTCTGCCACTGCTGAAGAAATACAAACGGCTACAAAATGTTTTATTACTCTTGGGATCATCGTTGATGAAACTTGATGACGCTCTTATGCTATTCCATGACTTCTGA 1527 0.4132 MAPQWGIKFAVYLITNHFGKIVANVCENLLNHGALTLDLVIRYTELSPEHAKNALLVLIQHNCVQAFVAAGGDEDGSRVKTQYMVLFDNILHRLRFPKFMEIVSGELDDKCTKIFEGLLRDGRLTMKQMVDRESQGKENAAAAAAVRESLLKLLMARFVERCPLPEARVVEEEIVTKKRGAKGSQTFKAPATKEQRVIEAAVRGDMIRFSLNADIGCNSDGETNPADTSVAENDAKEDLILWRANFEEFVRHLRDKALIENIRTRVDDGAAIVLSAILKATRNKDKEVKIEKSVPLPLDTIFSEVIKTENGRTMTIDRVKGALVQLGCSNQMLYEYIVDFKHILRWARNEEVESIVLKRYGRDAYRMFRHLSKENQFCPTDKLADATLVDKKEASKLLYQLWKENYLHMEKLSVTGANTRPVPILMWKVNQPLLWENVLDEMYHGALNLKLRMAFEQEKEEEIINTPKAKINESLPLLKKYKRLQNVLLLLGSSLMKLDDALMLFHDF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04389 508 Gene3D - 87 170 IPR036388 -
Vivi1g04389 508 Gene3D - 245 333 IPR036388 -
Vivi1g04389 508 FunFam DNA-directed RNA polymerase III subunit rpc3 87 169 - -
Vivi1g04389 508 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 5 508 IPR039748 GO:0003697|GO:0005666
Vivi1g04389 508 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 11 68 IPR013197 -
Vivi1g04389 508 Gene3D - 340 430 IPR036388 -
Vivi1g04389 508 FunFam DNA-directed RNA polymerase III subunit RPC3 2 85 - -
Vivi1g04389 508 Pfam RNA polymerase III subunit RPC82 149 317 IPR008806 GO:0003677|GO:0006351
Vivi1g04389 508 Gene3D - 4 74 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04389 K03023 - gmx:100784750 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04389 1 93672133 93686275 Vivi1g04389 1 93672133 93686275 ECH