Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04387 ATGGCCTCTATATTTGTCTCAAGAAGTTTGGTTATAGTCTCCCTTCTAATATCTCTAACCCTACCAGCCACTCTTGGAGGCATAGAATGTGAGAATCTAAGCACAGAAACATGTTCATTTGCGGTTTCATCTAGCAGCAAAAGGTGTGTCCTCGAGAAACACGTGAAAAGGTCAGGTGAAGAAGCATACACATGCAGAACATCAGAGATAGAAGCTGATAAACTAAAAGATCACATCGAAAGCGACCAATGTATAAAAGCTTGTGACTTAGACAGAAAATCACTTGGAATTTCATCAGACTCACTTCTGGAATCTCGTTTCACAGAGAAGCTATGTTCTCCACAGTGTTACAAGAGTTGTCCAAATATTGTTGATCTTTACTTCAATCTTGCAGCTGGTGAAGGAGTGTTTCTTCCTAAGTTGTGTGAGGTGAAAGGTGGATCAAATGCTCGTCGTGGAATGGCGGAATTGAGAAGCTCTGGTTATGTGGCACCAGGACCTGTGCATCCAGTGGAGTTTGTAGCTTCAGCTCCACAGCCAATAGGGTATGTGGAGTTGGCAGATGAACCTGTGGTTGCTCCAGCATACCCACCACCATACTAA 603 0.4328 MASIFVSRSLVIVSLLISLTLPATLGGIECENLSTETCSFAVSSSSKRCVLEKHVKRSGEEAYTCRTSEIEADKLKDHIESDQCIKACDLDRKSLGISSDSLLESRFTEKLCSPQCYKSCPNIVDLYFNLAAGEGVFLPKLCEVKGGSNARRGMAELRSSGYVAPGPVHPVEFVASAPQPIGYVELADEPVVAPAYPPPY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04387 200 Pfam PAR1 protein 28 175 IPR009489 -
Vivi1g04387 200 PANTHER PAR1 PROTEIN 9 175 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04387 Vivi-Chr1 93597563 93598554 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04387 - - gmx:100787709 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04387 1 93597563 93598554 Vivi1g04387 1 93597563 93598554 ECH
Vivi2g05440 2 179536173 179537209 Vivi1g04387 1 93597563 93598554 PCT