Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04377 ATGGCTAACGCAGCGTCTGGAATGGCTGTTAACGATGAATGTAAATTGAAGTTTCTCGAATTAAAAGCGAAGAGAAACTACCGTTTTATTGTGTTTAAGATCGAGAATCAAGAAGTTGTAGTGGAGAAGCTTGGAGGTCCGGAAGAAACCTACGAGGACTTCAGTGCATGTCTACCTGCTGATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCACCACCGCTGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGTCACCAGATATTTCAAAAGTGAGACATAAGATGGTGTATGCTAGCACCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACAGATCCAAGTGAAATGAGCTTTGACATCGTTAAATCGCGAGCACTATAA 414 0.4155 MANAASGMAVNDECKLKFLELKAKRNYRFIVFKIENQEVVVEKLGGPEETYEDFSACLPADECRYAVFDFDFTTAENCQKSKIFFIAWSPDISKVRHKMVYASTKDRFKRELDGIQVELQATDPSEMSFDIVKSRAL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04377 137 ProSiteProfiles ADF-H domain profile. 7 137 IPR002108 GO:0003779
Vivi1g04377 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Vivi1g04377 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Vivi1g04377 137 SMART adf_2 12 137 IPR002108 GO:0003779
Vivi1g04377 137 Gene3D Severin 1 137 IPR029006 -
Vivi1g04377 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Vivi1g04377 137 SUPERFAMILY Actin depolymerizing proteins 2 135 - -
Vivi1g04377 137 FunFam Actin-depolymerizing factor 2 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04377 Vivi-Chr1 93423902 93425299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04377 K05765 - tpra:123911604 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04377 1 93423902 93425299 Vivi1g04377 1 93423902 93425299 ECH