Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g04371 | ATGGCTCAGCAGAAGGTGGTGTTAAAGGTCCTTACTATGACGGATGACAAAACAAAGAAGAAATCAATAGAAGCAGTTGCAGATATCTATGGAGTTGATTCAATTGAGACAGATGTTAATGAACAGAAGTTAACAGTGATTGGCGAAATGGATACAGTGGCAGTAGTGAAGAAGCTGAAGAAAGTGGGGAAGGTAGATATAGTATCAGTTGGACCTGCCATAGAAGAGAAGAAAGAAGAGAAGAAAGAAGAAAAGGAAGAGAAAAAGGAAGAGAAACAAGAGGAGAAAAAATAA | 294 | 0.381 | MAQQKVVLKVLTMTDDKTKKKSIEAVADIYGVDSIETDVNEQKLTVIGEMDTVAVVKKLKKVGKVDIVSVGPAIEEKKEEKKEEKEEKKEEKQEEKK | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g04371 | 97 | MobiDBLite | consensus disorder prediction | 76 | 97 | - | - | |
| Vivi1g04371 | 97 | Coils | Coil | 71 | 97 | - | - | |
| Vivi1g04371 | 97 | ProSiteProfiles | Heavy-metal-associated domain profile. | 4 | 67 | IPR006121 | GO:0046872 | |
| Vivi1g04371 | 97 | PANTHER | COPPER TRANSPORT PROTEIN FAMILY-RELATED | 4 | 92 | - | - | |
| Vivi1g04371 | 97 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 64 | IPR036163 | GO:0046872 | |
| Vivi1g04371 | 97 | Gene3D | - | 1 | 76 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi1g04371 | Vivi-Chr1 | 93297706 | 93298785 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g04371 | - | - | cam:101498730 | 122.864 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi1g04371 | 1 | 93297706 | 93298785 | Vivi1g04371 | 1 | 93297706 | 93298785 | ECH |