Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04330 ATGAATTCTAAGAGAGATGTTGAAAGTGGTGGTGAAGGGACAAAGAGCACCAACAATTACACTGCTGTTGCGAATTCAATTTCATATGGTTATCATGCTTATAACCATAGGATATCATGGCTTGTACCTGTTGTTGTGGCGGTTAACGTTGTTGTTTTCATTGTGGCCATGGCTATTAACAATTGTCCCGAGGATAATTTTGGTTTTCAAGGTGATTGTGTTCCTGAGTTCCTTGGGAGATTCTCTTTTCAACCATGGAGGGAGAATCCATTGCTTGGTCCTTCTTCATCAACATTAACCAAGATGGGAGCTCTTAAATGGGAAAATATTGTGCACCAGAACCAAGGATGGAGACTCTTCACTTGCATTTTGTTACATGCTGGAATTATTCACTTGCTCTCAAACATGGTATACCTTGTTTTCATTAGCATTCGCTTGCAATTCGGATCTCTGAGAATTGGATTGATATACCTATTGTCTGGATTTGGAGGAAGTGTACTGTCTTCTCTTTTTATTCGAAATAGCATCTCCGTCGGCGCTTCTGGTGCGCTTTTGGGACTTCTTGGAGCAATGCTATCAGAACTTCTTACAAATTGGTCTATATATTTCGATAAAGTGACCGTTTTGATCGATCTTCTAATTATCATTATCATCAACCTCGCAATAGGCATTTTACCGTACGTTGATAACTTTGCTCATATTGGAGGATTTGCAACCGGACTTCTACTCGGTTTCGTTTTACTTCCTCGCCCTCAATGCGGTTGGTTAGAGCAGCGTAGTCTTCCTGCTGGGATTCGTCTCAAATCAAAATTCAAAGCTTACCAGTACATTCTTGGGATTGTGTCTCTAATTCTCTTGATTGTCGGATTTTCAATTGGATTGGTGATGCTGTTCAACGAAGAGAATGGATATGATCACTGTCATTGGTGTCACTACCTAACATGTGTGCCAAGTGTATGGGAATGCAACAATGAGAATTAA 981 0.4027 MNSKRDVESGGEGTKSTNNYTAVANSISYGYHAYNHRISWLVPVVVAVNVVVFIVAMAINNCPEDNFGFQGDCVPEFLGRFSFQPWRENPLLGPSSSTLTKMGALKWENIVHQNQGWRLFTCILLHAGIIHLLSNMVYLVFISIRLQFGSLRIGLIYLLSGFGGSVLSSLFIRNSISVGASGALLGLLGAMLSELLTNWSIYFDKVTVLIDLLIIIIINLAIGILPYVDNFAHIGGFATGLLLGFVLLPRPQCGWLEQRSLPAGIRLKSKFKAYQYILGIVSLILLIVGFSIGLVMLFNEENGYDHCHWCHYLTCVPSVWECNNEN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04330 326 FunFam RHOMBOID-like protein 35 250 - -
Vivi1g04330 326 PANTHER RHOMBOID-RELATED 16 322 IPR002610 GO:0004252|GO:0006508|GO:0016020
Vivi1g04330 326 Pfam Rhomboid family 111 251 IPR022764 GO:0004252|GO:0016020
Vivi1g04330 326 Gene3D - 32 250 IPR035952 -
Vivi1g04330 326 SUPERFAMILY Rhomboid-like 37 252 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04330 Vivi-Chr1 92300616 92302203 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04330 - - gmx:100813345 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04330 1 92300616 92302203 Vivi1g04330 1 92300616 92302203 ECH