Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04328 ATGAAATATTGTACAATGGGAAGCTACAAGGTATTAGGAATAATTGGGATTTTGATGTTGCTATTCTCACCCCCATTAGTTTTTGCAAGCATAGAATGCTCCATAGTAGCTCAACTTTTTTCTTCATGCTCTACTTTCATCAGATATGGCACTCCAAATCCAGTTCCAGGGTCCCCTTGTTGTAACGCCATGTCAGGATTGAGTATAATTTCTGATTCAGGTAAAAATAAGCAATCTGTTTGTAGATGCATAGTGAGACTAATTCAAAATTATAGCTCAAATGCCACAGCTATAGGTATTTTGCCAGGTTTTTGTGGTATCTCTTTGGGCTTCACAATTATTCGCAATTCAGATTGTATAGTGCCTTATGAGTAA 375 0.368 MKYCTMGSYKVLGIIGILMLLFSPPLVFASIECSIVAQLFSSCSTFIRYGTPNPVPGSPCCNAMSGLSIISDSGKNKQSVCRCIVRLIQNYSSNATAIGILPGFCGISLGFTIIRNSDCIVPYE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04328 124 PRINTS Plant phospholipid transfer protein signature 76 91 IPR000528 GO:0006869|GO:0008289
Vivi1g04328 124 PRINTS Plant phospholipid transfer protein signature 55 69 IPR000528 GO:0006869|GO:0008289
Vivi1g04328 124 PRINTS Plant phospholipid transfer protein signature 110 121 IPR000528 GO:0006869|GO:0008289
Vivi1g04328 124 PRINTS Plant phospholipid transfer protein signature 92 109 IPR000528 GO:0006869|GO:0008289
Vivi1g04328 124 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Vivi1g04328 124 Gene3D - 31 121 IPR036312 -
Vivi1g04328 124 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 119 IPR036312 -
Vivi1g04328 124 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 17 119 IPR000528 GO:0006869|GO:0008289
Vivi1g04328 124 CDD nsLTP1 31 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04328 6 119 Acyl Lipid Metabolism Gene Families AT2G18370 27.193 5.74e-10 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04328 - - aprc:113871819 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04328 1 92274171 92275062 Vivi1g04328 1 92274171 92275062 ECH