Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04323 ATGGGGTCTAGTATTTCTTCAAGTGCATCTAATATTAGAGAAAAAAATTATTCTTCATCATCATCAAGAAGAACGAGTTTTGGTGATATTCCAGAAAGCTGCATCTCTTCTATCCTCATAAATCTTGATCCACCTGATATATGTAAATTGGCTAGAGTCAACCATGCTTTTCATAGAGCTTCTTCATCTGATTTTGTGTGGGAATCTAAGTTGCCATCATGCTACAAGTTTCTTGCTAGGAAAGTTCTTGATGAAGAAAGTGTTTCCACTATGACTAAGAAAGAGATCTACACAAAACTATGTCAACGCAATCTCTTTGATTGTGATACCAAAGAAGTTTTGTTGGATAAATGCAGTGGACAAATTTGTTTGTTCATGTCATCAAAGTCTTTGAAGATAACTGGAATAGATGATAGAAGATATTGGATTTACATTCCAACTGAGGAATCAAGGTTTAAGAATGTGGCTTATCTTCAACAAATGTGGTGGGTTGAAATCATAGGAGAGTTAGAGTTTTTATTTCCTGTGGGGAGTTACAGCGTAAATTTCAGACTAAAATTGGGAAAGTCGTCGAAACGATTGGGCCGACGTGTTTGCAACGTTGATCAGGTGCATGGCTGGGATGTAAAGCCGGTTAGATTTAAATTGACTACATCGGACGGTGAATGTTCGATCTCGGAGTGTTATTTGAATGAGCCAGGGGAATGGGTTTATTACCATGTGGGAGATTTTGTGGTTGTAAAGCCCAATGAGCCCATGAAAATTAAGTTTTCTTTGGCCCAAATTGATTGTACTCATACCAAAGGTGGGTTATGTGTAGATAGTGCAATTATTTGCCCAAGTGAGTTTAGAGAAAGACTCAAGCAGTATTAG 873 0.3757 MGSSISSSASNIREKNYSSSSSRRTSFGDIPESCISSILINLDPPDICKLARVNHAFHRASSSDFVWESKLPSCYKFLARKVLDEESVSTMTKKEIYTKLCQRNLFDCDTKEVLLDKCSGQICLFMSSKSLKITGIDDRRYWIYIPTEESRFKNVAYLQQMWWVEIIGELEFLFPVGSYSVNFRLKLGKSSKRLGRRVCNVDQVHGWDVKPVRFKLTTSDGECSISECYLNEPGEWVYYHVGDFVVVKPNEPMKIKFSLAQIDCTHTKGGLCVDSAIICPSEFRERLKQY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04323 290 ProSiteProfiles F-box domain profile. 24 70 IPR001810 GO:0005515
Vivi1g04323 290 Pfam Phloem protein 2 122 280 IPR025886 -
Vivi1g04323 290 Gene3D - 13 121 - -
Vivi1g04323 290 SUPERFAMILY F-box domain 17 98 IPR036047 GO:0005515
Vivi1g04323 290 PANTHER F-BOX PROTEIN PP2-A15 10 288 - -
Vivi1g04323 290 CDD F-box_AtSKIP3-like 27 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04323 Vivi-Chr1 92042366 92044929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04323 - - gmx:100795463 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04323 1 92042366 92044929 Vivi1g04323 1 92042366 92044929 ECH