Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04321 ATGGCAGCCTTAAGCTGCCAGTTTCATTCCATCAACTACTTGAATTCTCAGAAGCTCAAAACCAGAACCAAGCATTCCATAATTTCATGCTCATCATCACAGCCTATGCAAAGCAATATAAAGGTTGTGATAAATGGAGCAGCCAAGGAAATAGGAAGAGCTGCAGTATTAGCTGTGACAAATGCTAGAGGAATGGAAGTTGCTGGAGCCATTGATACTCACCATGTTGGAGAAGATATTGGACAGGTTTGTGGAATGGAAGAGCCCCTTGAAATACCTATACTAAATGACCTTACTATGGTTTTGGGCTCTATATCTCAGTCCAAGGCCACAGCAGTTGTAGTTGATTTCACCGACCCTTCCACAGTATATGACAATGTAAAACAGGCAACAGCATTCGGCATGAAAAGCGTCATTTACGTACCACGAATCAAATCAGATACGGTGGCAGCATTATCTGCATTCTGTGACAAAGCCAGCATGGGTGTTTTGGTTGCTCCAACTCTTTCCATAGGATCAATATTATTACAGCAGGCTGCAATTTCAGCTTCTTTCCATTACCGCAACATCGAAATCGTGGAATCCAAGTCTAATGCAAATGATCTTCCATCAGCAGATGCAAACCAAATTGCGAACAATCTCTCGAACCTCGGTCAAATCTATAACAGAGAAGATTCCTCAACAGATGTTTTGGCAAGGGGTCAAGTTTTGGGAGATGGAATTCGTGTGCATAGTTTGGTCTTACCAGGGCTTCCTTCTAGTACAACAGTTCACTTTTCTGGCCTAGGAGAGATTTACACCATCAAGCATGATATTACAGATGTACAATGTCTCATGCCAGGGTTGCTTTTAGCCATTAGAAAAGTAGTGAGAATCAAGGTACCTCAACTATTTCAAGTCTATGGTTTAAGCTAG 915 0.4186 MAALSCQFHSINYLNSQKLKTRTKHSIISCSSSQPMQSNIKVVINGAAKEIGRAAVLAVTNARGMEVAGAIDTHHVGEDIGQVCGMEEPLEIPILNDLTMVLGSISQSKATAVVVDFTDPSTVYDNVKQATAFGMKSVIYVPRIKSDTVAALSAFCDKASMGVLVAPTLSIGSILLQQAAISASFHYRNIEIVESKSNANDLPSADANQIANNLSNLGQIYNREDSSTDVLARGQVLGDGIRVHSLVLPGLPSSTTVHFSGLGEIYTIKHDITDVQCLMPGLLLAIRKVVRIKVPQLFQVYGLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04321 304 Gene3D - 39 197 - -
Vivi1g04321 304 Pfam Dihydrodipicolinate reductase, C-terminus 175 299 IPR022663 GO:0008839|GO:0009089
Vivi1g04321 304 FunFam Dihydrodipicolinate reductase, C-terminus family protein, expressed 170 273 - -
Vivi1g04321 304 FunFam Dihydrodipicolinate reductase family protein 39 196 - -
Vivi1g04321 304 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 170 274 - -
Vivi1g04321 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 194 IPR036291 -
Vivi1g04321 304 Pfam Dihydrodipicolinate reductase, N-terminus 40 167 IPR000846 GO:0008839|GO:0009089
Vivi1g04321 304 NCBIfam 4-hydroxy-tetrahydrodipicolinate reductase 40 298 IPR023940 GO:0008839|GO:0009089
Vivi1g04321 304 PANTHER DIHYDRODIPICOLINATE REDUCTASE 23 302 IPR023940 GO:0008839|GO:0009089
Vivi1g04321 304 PIRSF DHPR 38 303 IPR023940 GO:0008839|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04321 Vivi-Chr1 92035461 92037828 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04321 K16908 - gmx:100782083 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04321 1 92035461 92037828 Vivi1g04321 1 92035461 92037828 ECH