Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04308 ATGGGTTCTTCTAGAGGTGATTCAGCATCATGGTATTGTGCAATAGCGTTATTGGGTATGATATTATTGGGATCAATAAGGGAAAGTACTGTGGCTGAAGCTGAAGGTGAATCGTCGGAAGTACGAGGGAACCAGTTTGGTCATGATAACAAAGTGTGTGATGAGATATATGTTGTGGGAGAAGGAGAAACACTACATACTATAAGTGAAAAGTGTGGTGACCCGTATATTGTGGAGAGGAATCCACATATTCATGACCCGGATGATGTTTTTCCCGGGCTTGTTATTAGAATCATCACGCCGACCAATACTAGGAAGTTTTTGAAAAGATGA 333 0.4114 MGSSRGDSASWYCAIALLGMILLGSIRESTVAEAEGESSEVRGNQFGHDNKVCDEIYVVGEGETLHTISEKCGDPYIVERNPHIHDPDDVFPGLVIRIITPTNTRKFLKR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04308 110 CDD LysM 56 98 IPR018392 -
Vivi1g04308 110 PANTHER EMBRYO SAC 1 6 106 - -
Vivi1g04308 110 Gene3D LysM domain 50 107 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04308 Vivi-Chr1 91775103 91776032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04308 - - qsu:112037248 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04308 1 91775103 91776032 Vivi1g04308 1 91775103 91776032 ECH