Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04306 ATGGGCTGGTTCTTGGAACATTTTATAAGGTTATTTCTTGCTGGAAGCTTGTTCTTTATTGGCTTATCTTATTCTTATAAAGCTTCAAAATACACATTTATCAAAGAAGCAACATTTGCTCCTTCAAGCTCAACATATGACTATATAGTAATTGGTGGAGGATCATGTGGTTGTCCCCTAGCAGCAACACTTTCACAAGGTGGAAAAGTTTTACTCCTTGAAAGAGGAGGGTCACCATACACTAATCCAGAAGAAATCAACATACAAAAATTTGTTCATTCTCTAGCCGACACGAGTCCTTCGTCTTTCTCGCAACAATTCATCTCAACCGATGGTGTGCTCAATTCGCGCGCTCGCGTCCTAGGAGGAGGTTCTGTCTTGAACGCGGGATTCTACTCGAGGGCTAGCTATAGTTACATAAGAGAGTCAGGTTGGAATGAAAGTTTGGCCAGGAGTTCATATAAATGGGTTGAAAAGAAAGTTGCTTTTGAGCCTCCAATGATGCAATGGCAAACAGCAGTGAGGGATGGTTTACTTGAAGCAGGGGTTTTGCCTTACAATGGTTTTACTTTTGATCATTTGTTGGGGACTAAGGTTGGAGGGTCAATTTTTGATAAGGAGGGTCGTAGACACACTGCAGCTGATTTGTTAGAGTATGCTGATCCAAGGACAATTTCTGTTTATTTATATGCCACAGTTCAAAAGATACTTTTTAGGTATAATGAAGGTATGAAGCCACAAGCTTATGGAGTGATATTCAAAGATGCATTAGGAATCATACATAGAGCATACATAAGCTCCAAAATGAAGAATGAAATAATAGTATCAGCTGGTGCAATAGGAACTCCACAGCTGCTGATGCTAAGTGGCATTGGTCCTGCTAACCATCTTAAATCACATGGAATTCAAGTTGTTTTGGATCAGCCTCTGGTTGGTCAAGGGATGGCAGATAATCCAATGAATGTTCTAATTGTTCCTTCTCCTTTACCTGTCGAAGTTTCTCTCATTCAAACGGTTGGAATCACCAGGTCCGGTAGCTTCATCGAAACGGCCAGTGGCTTGGGCTTTGGCAATTCTTGGACTGATCGGCTTAGAGGGATTTTCGAATTTGTGTCAAACCAGAGTGGCATACCGTCCAAGTTTACGCCAGAAGCAATGGACAGTGTTGCAGACACCATTCGATCATTAGCCAATCCGGTTCTAAAAGGAGGAGTCATACTCGAAAAGATAATGGGACCGAGATCCACAGGTCACCTAGAGCTCCTAACAACTAACCCCAATGATAATCCATCGGTTACGTTTAACTATTTCAAAGATCCAGAAGACTTGAGAATGTGCGTTGACGGAATGAAAACAATCATAAATGTGATAAACTCAAAAGCATTCTCAAGATTTCGATATCCCAACATGCCTGTACAAGCTCTATTTGACTTGATGCTACATTTATCGGTTAACTTGAGACCAAAACATGCTAGTGCTGCGTTTTCTTTGGAGCAATATTGCATTGACACTGTCTTAACAATTTGGCATTATCATGGTGGTTGCCAACAAGGTAAAGTTGTTGATCATAACTATAAAGTCAACGGCGTTGAAGCTCTTAGAGTAATTGATGGTTCCACTTTTCTTCGATCACCGGGGACTAATCCTCAAGCTACTGTAATGATGCTCGGAAGGTATATGGGACAAAAGATTATAAGGAACAGACTCTCTCAGGGGAGGAAGTGA 1725 0.4116 MGWFLEHFIRLFLAGSLFFIGLSYSYKASKYTFIKEATFAPSSSTYDYIVIGGGSCGCPLAATLSQGGKVLLLERGGSPYTNPEEINIQKFVHSLADTSPSSFSQQFISTDGVLNSRARVLGGGSVLNAGFYSRASYSYIRESGWNESLARSSYKWVEKKVAFEPPMMQWQTAVRDGLLEAGVLPYNGFTFDHLLGTKVGGSIFDKEGRRHTAADLLEYADPRTISVYLYATVQKILFRYNEGMKPQAYGVIFKDALGIIHRAYISSKMKNEIIVSAGAIGTPQLLMLSGIGPANHLKSHGIQVVLDQPLVGQGMADNPMNVLIVPSPLPVEVSLIQTVGITRSGSFIETASGLGFGNSWTDRLRGIFEFVSNQSGIPSKFTPEAMDSVADTIRSLANPVLKGGVILEKIMGPRSTGHLELLTTNPNDNPSVTFNYFKDPEDLRMCVDGMKTIINVINSKAFSRFRYPNMPVQALFDLMLHLSVNLRPKHASAAFSLEQYCIDTVLTIWHYHGGCQQGKVVDHNYKVNGVEALRVIDGSTFLRSPGTNPQATVMMLGRYMGQKIIRNRLSQGRK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04306 574 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 514 - -
Vivi1g04306 574 SUPERFAMILY FAD/NAD(P)-binding domain 37 567 IPR036188 -
Vivi1g04306 574 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Vivi1g04306 574 PIRSF Alcohol_oxidase 28 574 IPR012132 GO:0050660
Vivi1g04306 574 Pfam GMC oxidoreductase 413 558 IPR007867 GO:0016614
Vivi1g04306 574 Gene3D - 163 507 - -
Vivi1g04306 574 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Vivi1g04306 574 Gene3D - 46 557 IPR036188 -
Vivi1g04306 574 PANTHER OSJNBA0019K04.7 PROTEIN 19 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04306 Vivi-Chr1 91712428 91715014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04306 8 568 Miscellaneous Gene Families AT5G51950 58.730 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04306 - - gmx:100780453 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04306 1 91712428 91715014 Vivi1g04306 1 91712428 91715014 ECH