Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04293 ATGTTTCCAACCTCACATGCTAGAATCTTCCCTTTTCAAGACAAAAATACAAATTTCCATTCTTTAAAAGCTAACAGATTTTTCTCTTACACGCATTGTATTGCATTGCATGATCTCTTCCTTCTCTGTGTAAACTCTAAACTATTGAATTGCAACACTCTGTTTCTTGCTTCCAAATTCAATCCCATGGCTCAATTTACCCCCTCAGGTAAATCTGATGATCGCATGACAGAAGGATGCGATGAAACAAGTGGACTGGTTGTTTGTTTTGGTGAGTTGTTGATAGATTTCGTGCCAACGGTAGGTGGTGTGTCTCTAGCTGAAGCGCCTGCTTTCAAAAAAGCTCCTGGTGGTGCTCCTGCGAATGTCGCAGTTGGCATCTCTAGGTTGGGGGGTTCGTCTGCGTTTATAGGCAAGGTTGGGGCAGATGAATTTGGTTATATGTTAGCTGATATTTTAAAGCAAAATAACGTTGATACATCTGGCATGCGGTATGATTCCATTGCAAGGACTGCATTGGCTTTTGTTACACTTAAAGCTGACGGCGAGCGCGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTGCGCGAGTCAGAGCTAGATCACAACCTCATCGAGAAGGCTAAAATATTCCATTATGGTTCCATCAGTTTGATTGATGAGCCTATCAAATCAGCTCATCTTGCTGCCTTGAGAATTGCTAGAGACTCTGATTGCATTCTCTCGTATGATCCGAATTTGAGATTAGCACTATGGCCGTCAGCCGAGGCTGCTCGGGATGGTATAATGAGCATATGGGATCTAGCCGATGTCATAAAGGTCAGTGAAGATGAGGTTACTTTTTTGACTGGTGGCGATGATCCTTACGACGATAATGTTGTATTAAACAAGCTTTTTCATCCTAATCTCAAGCTTCTAATTGTTACCGAAGGGTCAGAGGGTTGTAGATATTACACCAAGGATTTTAAGGGAAAAGTCGGAGGTGTAAAAGTTAAACCCGTTGACACAACTGGTGCTGGCGACGCATTTGTTAGTGGGATTCTCTACAAGATAGCTTCTGACCCAAGTATTTTCAAGGACGAGAAGCGTCTCCAAGAAGCGCTATATTTCGCCAATGTATGTGGCGCTATCACGGTGACAGATAGAGGGGCAATTCCTGCACTACCTACAAAAGAGGCTGTCATGCAATTCAATGCAAAATAG 1212 0.4282 MFPTSHARIFPFQDKNTNFHSLKANRFFSYTHCIALHDLFLLCVNSKLLNCNTLFLASKFNPMAQFTPSGKSDDRMTEGCDETSGLVVCFGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKQNNVDTSGMRYDSIARTALAFVTLKADGEREFLFFRNPSADMLLRESELDHNLIEKAKIFHYGSISLIDEPIKSAHLAALRIARDSDCILSYDPNLRLALWPSAEAARDGIMSIWDLADVIKVSEDEVTFLTGGDDPYDDNVVLNKLFHPNLKLLIVTEGSEGCRYYTKDFKGKVGGVKVKPVDTTGAGDAFVSGILYKIASDPSIFKDEKRLQEALYFANVCGAITVTDRGAIPALPTKEAVMQFNAK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04293 403 Gene3D - 84 403 IPR029056 -
Vivi1g04293 403 PRINTS Ribokinase signature 112 131 IPR002139 GO:0016301
Vivi1g04293 403 PRINTS Ribokinase signature 309 320 IPR002139 GO:0016301
Vivi1g04293 403 PRINTS Ribokinase signature 267 282 IPR002139 GO:0016301
Vivi1g04293 403 Pfam pfkB family carbohydrate kinase 86 393 IPR011611 -
Vivi1g04293 403 SUPERFAMILY Ribokinase-like 87 400 IPR029056 -
Vivi1g04293 403 CDD bac_FRK 86 388 - -
Vivi1g04293 403 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 117 141 IPR002173 GO:0016301
Vivi1g04293 403 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 338 351 IPR002173 GO:0016301
Vivi1g04293 403 PANTHER HEXOKINASE FAMILY MEMBER 86 400 - -
Vivi1g04293 403 FunFam Probable fructokinase-2 84 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04293 Vivi-Chr1 91443564 91446278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04293 K00847 - gmx:100818404 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04293 1 91443564 91446278 Vivi1g04293 1 91443564 91446278 ECH