Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03964 ATGAAAAAAATTGCTATAAATTGGTCAGTGCATTGTTGTTTGATTAGTCACAAGATGAAGGCTGTTGCTGCAGCAGAGTTATGCATTTTCTTGCTCTCTGTATCTTGCCTTCTACTCCTTTCTTCAGGGTTTCATCTGCATTCTAAACATTATGATTATTCTGCTACTACAGAGTGTTTAAAAGAACCTCATAGGGCACAATATGGAGGAGGCATTATAGTAAATCCAGGGTTTGATCATAACATAAAGGGTTGGACTGTGGTTGGAAATGGAACAATTGAGGAACGGATATCAAATGATGGCAATCGATTCATTGTTTCTCGCAACAGAACACGAGCATTGGATGGTTTCTCGCAGAAGGTTCATCTGAAGAAAGGATTGATATACATTTTTTCTGCTTGGTTTCAGCTGAGTGAAGGAAATGAGTTTGTTTCGGTTGTTTTTAAAACGAATGAAAGTGAATTGGTACATGGTGGTCGTGTGATAGCCAAGCATGGTTGCTGGTCTCTGCTAAAAGGGGGCATAGTTGCAAAGTTTTCAAGGCATGTTGAGATTCTATTTGAGATTGAGAATCCAACTGTGGAACTATGGGCTGATAGTGTGTCCTTACAACCATTCACCAGAAAGCAATGGCGATTACACCAACGCGACAGCGTTGAGGGGGTACGTAAGAGAAGGGTGAGATTCCAGGTTACTCATCCAAACGGAACAGCGTTGGAAGGGGCAACCGTTGTTATCAAACAAACAAGGGCAGATTTTCCATTTGGATGTGCGATGAATCATTATATCCTCACAAACAAAGACTACCAGAAATGGTTTGTTTCAAGATTCAAATACACAACTTTCACCAACGAGATGAAGTGGTATAGTACAGAAATAGTTCAAGGATACGAAAACTATACCATCCCAGATGCCATGTTACAATTTTCTAAAGAAAATGGCATTTTTGTAAGAGGTCATAACATTTTCTGGGACAGTCCAAGACGTCAACCTCATTGGGATTTGACCTTGTCTCCTGACGAATTACGAGTAGCAGCTGATAAAAGAATGAATTCTGTTGTCTCAAGGTATAAAGGACAAGTTATTGCATGGGATGTCGTGAATGAGAATGTCCACTTCCACTTTTTTGAGGACAAACTTGGCGAAAATATCTCTGCAGAATATTATTTAGCAGCTTACCGTCTTGATCCAAATACCGAGATGTTCATGAATGAGTATAACACCATTGAGGTCGTTGGGGATAAGAATGCCAGCCCAACCAATTATATCAGGAAACTTAAAGAGATTCAGCAATTTCCAGGAATTGATGGAATATCATTGGCCATAGGGTTGCAAGGCCATTTTCCAAGGGGTGTGCCAAACCTTGCTTACATGAGGTCAGGTCTAGATCTTCTTGCCGCAACTGGACTTCCTATATGGCTCACAGAAGTCAGTGTGGATGCTCAGCCAAATCAGGCAGAGTACTTTGAAGACGTACTAAGAGAGGGTTTCTCTCATCCTGCTGTTCAAGGGATTATAATGTTTGTAGGGCCAGAACAAGCTGGCTTCGACAGTACATTACTTGCAGATTCAAATTTTAAAAATACTCCTGCCGGAGATGTTGTGGACAAGCTGATTCGCGAGTGGGGAACTGGTCCTCAAACAGACATAGCAGATAGAAGAGGAATTATAGATATTTCACTATATTATGGGGATTATGATGTTACTGTTACACATCCTCTAACCAAATACTCCAAAACAATGAATATAAGTGTAAGGAAAGGATTTTCTTTGGAAACTGTCCATGTGACAGTGGACGCCTAA 1803 0.4054 MKKIAINWSVHCCLISHKMKAVAAAELCIFLLSVSCLLLLSSGFHLHSKHYDYSATTECLKEPHRAQYGGGIIVNPGFDHNIKGWTVVGNGTIEERISNDGNRFIVSRNRTRALDGFSQKVHLKKGLIYIFSAWFQLSEGNEFVSVVFKTNESELVHGGRVIAKHGCWSLLKGGIVAKFSRHVEILFEIENPTVELWADSVSLQPFTRKQWRLHQRDSVEGVRKRRVRFQVTHPNGTALEGATVVIKQTRADFPFGCAMNHYILTNKDYQKWFVSRFKYTTFTNEMKWYSTEIVQGYENYTIPDAMLQFSKENGIFVRGHNIFWDSPRRQPHWDLTLSPDELRVAADKRMNSVVSRYKGQVIAWDVVNENVHFHFFEDKLGENISAEYYLAAYRLDPNTEMFMNEYNTIEVVGDKNASPTNYIRKLKEIQQFPGIDGISLAIGLQGHFPRGVPNLAYMRSGLDLLAATGLPIWLTEVSVDAQPNQAEYFEDVLREGFSHPAVQGIIMFVGPEQAGFDSTLLADSNFKNTPAGDVVDKLIREWGTGPQTDIADRRGIIDISLYYGDYDVTVTHPLTKYSKTMNISVRKGFSLETVHVTVDA 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03964 600 Gene3D - 60 206 - -
Vivi1g03964 600 Gene3D Glycosidases 242 545 - -
Vivi1g03964 600 Pfam Glycosyl hydrolase family 10 249 487 IPR001000 GO:0004553|GO:0005975
Vivi1g03964 600 SUPERFAMILY Galactose-binding domain-like 69 204 IPR008979 -
Vivi1g03964 600 Pfam Carbohydrate binding domain 71 173 IPR003305 GO:0016798
Vivi1g03964 600 SUPERFAMILY (Trans)glycosidases 239 545 IPR017853 -
Vivi1g03964 600 PANTHER GLYCOSYL HYDROLASE 49 587 IPR044846 GO:0004553|GO:0005975
Vivi1g03964 600 SMART glyco_10 286 538 IPR001000 GO:0004553|GO:0005975
Vivi1g03964 600 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 240 538 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03964 Vivi-Chr1 83557607 83560111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03964 47 585 Glycoside Hydrolase AT4G33840 50.369 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03964 - - gmx:100777980 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03964 1 83557607 83560111 Vivi1g03964 1 83557607 83560111 ECH