Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03962 ATGTTGAAATTTTTTGATATAAATTGGACGGTGCATTGTGGTTTGATTAGTCACAAGATGAAGGTTGTTGTTGCAGCAGAGTTATGCATTTTCTTGCTCTCCGCATCTTGCCTTCTACTCCTTTCTTCAGGGTTTCAACTCCATTCTAAACCTTATGATTATTCTGCTACTACTCAGTGTGTGAAAGAACCTCATAGGGCGCAATATGGAGGAGGCATTATAGTAAATCCAGGGTTTGATCATAACATAAAGGGTTGGACTGTGGTTGGAAATGGAACAATCGAGGAACGGATATCGAATGATGGGAATCGATTCATTGTTGCTCGCAACAGAACACGGGCATTGGATGGTTTCTCACAGAAGGTTCAACTGAAGAAAGGACTAATATACATTTTTTCTGCTTGGTTTCAGCTGAGTGAAGGAAGTGAGATTGTTTCGGTTGTTTTTAAAACAAATGGAAGTGAATTGGTACATGGTGGTCATGTGATAGCCAAGCATGGATGCTGGTCTCTGCTAAAAGGGGGCATTGTTGCAAACTTTTCAAGCCCTGCTGAGATTCTTTTTGAGACTGAGAATCCAACTGTGGAATTATGGGCTGATAGTGTGTCCTTACAACCATTCACCAAAAAGCAATGGAGATCACACCAAGACGACAGCGTTGAGAGGGTACGTAAGAGCAAAGTGAGATTCCGGGTAACTCATCCAAACGAAACAGTGTTGGAAGGAGCAACCGTTGTTATCAAACAAACAAGGGCGGATTTTCCATATGGATGTGCGATGAACCATTATATCCTCTCAAACAGTGACTACCAGAAATGGTTTGTTTCAAGATTCAAATACACAACTTTCACCAATGAGATGAAATGGTATAGTACAGAGAAAATTCAAGGCAAGGAAGACTATACTATCCCAGATGCCATGTTACAGTTTGCCAAAGAAAATGGCATTTCTGTGAGAGGTCATAACGTTTTGTGGGACAGTCCAAATCGTCAACCTCACTGGGATTTGACCCTGTCTCCCGACGAATTACGAGTAGCAGCTGAGAATAGATTGAAATCTGTTGTCTCAAGGTATAAAGGACAACTTATTGCATGGGATGTCGTGAATGAGAATGTCCACTTCCACTTTTTTGAGGACAAACTCGGCGAAAATATCTCTGCAGAATATTATTCAGCAGCTTACCGTCTTGATCCAAACACCAAGATGTTCCTGAATGAGTATAACACCATTGAGTTCAGCGGAGATAAGGATGCCAGCCCAGCCAACTATGTCAAGAAACTTAAGGAGATTCAGCAATTTCCAGGAACTGCTGGAATACCACTGGCCATTGGGTTGCAATGCCATTTTTCAACTGGTGTGCCAAACCTTGCTTATATGAGGTCAGGTCTAGATCTTCTTGCTGCAACCGGACTTCCGATATGGCTCACAGAAACCAGCGTGGATCCTCAGCCAAATCAGGCAGTGTACTTTGAACAGATACTAAGAGAGGGTTTCTCTCATCCTGCTGTTCAAGGGATTGTAATGTTTGTAGGACCAAAACAAGCTGGTTTCAACAGTACATTACTTGCAGATGCAAATTTTAAAAATACTGCTGCCGGAGACGTTGTGGACAAGCTGATTCGTGAGTGGGGAACTGGTCCTCAAACAGCCATAGCAGATAGTAGAGGAATTATAGATATTTCACTACATCATGGAGATTATGATGTTACTGTTACACATCCTCTAACCCAATACTCCAAAACAATGAATATAAGTGTAAGAAAAGGATTTTCCCTGGAAACTGTCCATGTGAAAATGCATGCCTAA 1806 0.4169 MLKFFDINWTVHCGLISHKMKVVVAAELCIFLLSASCLLLLSSGFQLHSKPYDYSATTQCVKEPHRAQYGGGIIVNPGFDHNIKGWTVVGNGTIEERISNDGNRFIVARNRTRALDGFSQKVQLKKGLIYIFSAWFQLSEGSEIVSVVFKTNGSELVHGGHVIAKHGCWSLLKGGIVANFSSPAEILFETENPTVELWADSVSLQPFTKKQWRSHQDDSVERVRKSKVRFRVTHPNETVLEGATVVIKQTRADFPYGCAMNHYILSNSDYQKWFVSRFKYTTFTNEMKWYSTEKIQGKEDYTIPDAMLQFAKENGISVRGHNVLWDSPNRQPHWDLTLSPDELRVAAENRLKSVVSRYKGQLIAWDVVNENVHFHFFEDKLGENISAEYYSAAYRLDPNTKMFLNEYNTIEFSGDKDASPANYVKKLKEIQQFPGTAGIPLAIGLQCHFSTGVPNLAYMRSGLDLLAATGLPIWLTETSVDPQPNQAVYFEQILREGFSHPAVQGIVMFVGPKQAGFNSTLLADANFKNTAAGDVVDKLIREWGTGPQTAIADSRGIIDISLHHGDYDVTVTHPLTQYSKTMNISVRKGFSLETVHVKMHA 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03962 601 SMART glyco_10 287 539 IPR001000 GO:0004553|GO:0005975
Vivi1g03962 601 SUPERFAMILY Galactose-binding domain-like 70 206 IPR008979 -
Vivi1g03962 601 Gene3D Glycosidases 243 546 - -
Vivi1g03962 601 PANTHER GLYCOSYL HYDROLASE 50 588 IPR044846 GO:0004553|GO:0005975
Vivi1g03962 601 Pfam Glycosyl hydrolase family 10 250 485 IPR001000 GO:0004553|GO:0005975
Vivi1g03962 601 Pfam Carbohydrate binding domain 72 174 IPR003305 GO:0016798
Vivi1g03962 601 Gene3D - 61 207 - -
Vivi1g03962 601 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 241 539 IPR001000 GO:0004553|GO:0005975
Vivi1g03962 601 SUPERFAMILY (Trans)glycosidases 240 546 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03962 Vivi-Chr1 83530731 83534216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03962 48 586 Glycoside Hydrolase AT4G33840 52.399 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03962 - - gmx:100777980 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03962 1 83530731 83534216 Vivi1g03962 1 83530731 83534216 ECH