Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03961 ATGAAAGTTGCAGCAAGATTATGCAATTTGTTAATGTTCACCACCATCTCTTTCCTTTTACTCTTCTCAGGTCTTGCCGTTGATGTTGATTCTAAGGATTATGATTATTTTGCTACTACTAAGTGTATAACAGAACCTCATAAAGCACAATATGGAGGGGGCATTATAGTAAATCCAGAATTTGATCACAACATACAGAGTTGGACAGTGTTTGGAAATGCAACAATAGAGAAAGGTTTATCAAATAAAGGAAATAGTTTCATTGTTGCTAGCAACAGAACACAAACATTGGATAGTTTTTCACAAAAGGTTCAACTCAAAAAAGAATTGATATACATGTTTTCAGGTTGGTTTCAGCTGAGTGAAGGAAGAGACCTAGTTTCTGTTGTGTTTAAAATAAATGGAAGTGAATTGGTATATGGTGGCCATGTGACAGCAAACAATGGATGCTGGTCTCTTCTAAAAGGCGGTATAGTTGCAAACTTCTCAAGCTCCGCCGAGATTCTTTTCGAGAGCAATAATCCGAATGTCGAAATATGGGCCGATAGCATCTCATTGCAACCATTTACTAAAGAAGAATGGAGATCACACCAAGACAACAACATCCAAAGGGTACGTAAGAGTAGGGTTAGATTTCATGTAAGTAATGAAAATGAAACAGCATTGGAAGGAGCAAAAGTTGTTGTAAAACAAACAAAAGCAAATTTTCCATTTGGATGCGGGATGAACTATCACATTCTCACAAACCGCGACTACCAGGAATGGTTTGCGTCAAGGTTCAAATACACAACTTTCACCAATCAAATGAAATGGTATAGCACGGAGATAATTCGTGGCCAAGAAAACTATACCATACCAGACGCAATGATGAAATTCACTAAAGAAAATGGAATTTCGGTGAGAGGTCATAATATATTTTGGGAAGATGAAAAATATCAACCTGAATGGGTGAAGTCGTTAACGCCGGAGGAATTACGAGAAGCTGCGGCAAAAAGGATAAAATCTGTCGTTACAAGATATAAAGGAGAGTTGATTGCATGGGATGTGATGAATGAGAATGTTCATTTTCATTTTTACGAGGATAAACTCGGTGAGAATGCATCTGAATTATACTATTTAAGAGCTTACGAGCTTGATCCAACAACAACATTGTTTATGAATGAGTATAACACAATCGAGTATAGCGGAGACAAGGTTGCTAGTCCAGCAAATTATTTCAACAAACTTGAAGAGATTCTGCAATCTCCAGAAGCTTCGAAAATGCCATTTGCAATTGGATTGCAATGCCATTTTGCAAGTGGCAGACCGAATCTCGCTTACATGAGATCAGGTCTAGATTTTCTTGGTGAAACTGGATTTCCTATATGGCTCACAGAAACCAGTGTGGATCCTCAACCAGAACAGGCAGAATATTTTGAAGAGATACTAAGAGAAGGTTACTCTCATCCAGCAGTTGAAGGGATAATAATGTTTGCTGGTCCAGCACAAGCTGGTTTCAACTCTACACTTCTTGCTGATGCAAATTTTCAAACAACTCCAACTGGAAAAGTTGTGGACAAGTTGATCAGTGAGTGGGGAATTGGACCTTATACAACAATAACAGATGGTAGAGGAATTGTAGATATTTCATTGCATCATGGAGATTATGATGTAACTGTTACTCATCCTTTAACACAACAGTCTGAAAAATTAAATATAAGTGTTGGGAAAGAATTTTCACATAAAAACATCCATGTGAAAATGCATGCCTAA 1752 0.3744 MKVAARLCNLLMFTTISFLLLFSGLAVDVDSKDYDYFATTKCITEPHKAQYGGGIIVNPEFDHNIQSWTVFGNATIEKGLSNKGNSFIVASNRTQTLDSFSQKVQLKKELIYMFSGWFQLSEGRDLVSVVFKINGSELVYGGHVTANNGCWSLLKGGIVANFSSSAEILFESNNPNVEIWADSISLQPFTKEEWRSHQDNNIQRVRKSRVRFHVSNENETALEGAKVVVKQTKANFPFGCGMNYHILTNRDYQEWFASRFKYTTFTNQMKWYSTEIIRGQENYTIPDAMMKFTKENGISVRGHNIFWEDEKYQPEWVKSLTPEELREAAAKRIKSVVTRYKGELIAWDVMNENVHFHFYEDKLGENASELYYLRAYELDPTTTLFMNEYNTIEYSGDKVASPANYFNKLEEILQSPEASKMPFAIGLQCHFASGRPNLAYMRSGLDFLGETGFPIWLTETSVDPQPEQAEYFEEILREGYSHPAVEGIIMFAGPAQAGFNSTLLADANFQTTPTGKVVDKLISEWGIGPYTTITDGRGIVDISLHHGDYDVTVTHPLTQQSEKLNISVGKEFSHKNIHVKMHA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03961 583 SMART glyco_10 269 521 IPR001000 GO:0004553|GO:0005975
Vivi1g03961 583 SUPERFAMILY Galactose-binding domain-like 52 188 IPR008979 -
Vivi1g03961 583 SUPERFAMILY (Trans)glycosidases 222 527 IPR017853 -
Vivi1g03961 583 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 223 521 IPR001000 GO:0004553|GO:0005975
Vivi1g03961 583 PANTHER GLYCOSYL HYDROLASE 32 568 IPR044846 GO:0004553|GO:0005975
Vivi1g03961 583 Gene3D - 43 189 - -
Vivi1g03961 583 Pfam Glycosyl hydrolase family 10 232 469 IPR001000 GO:0004553|GO:0005975
Vivi1g03961 583 Gene3D Glycosidases 226 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03961 Vivi-Chr1 83524033 83526531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03961 31 568 Glycoside Hydrolase AT4G33840 50.092 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03961 - - gmx:100777980 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03961 1 83524033 83526531 Vivi1g03961 1 83524033 83526531 ECH