Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03895 ATGGAAGATGGAGATTGGGTTCTGGTGCGCGCTCCCTCGCCAAAACACTTGTGGAAACCATCTTTACCAAATGCTGATCATCTTGATGATGATGAATCTTCAAGGCCATTGAAGGTTACTTTTTCTAGCCCTGCAAAGTACTGGACCGATGCAATCCCAATCGGTAATGGCAGTCTTGGTGCCATGGTTTGGGGTGGTGTTCACACTGATGTTCTACAGCTCAATGACACCCTGTGGACTGGGGTACCTGGTAACTACACCGACAAAAATGCTCCTGAGGTGCTGGCTGAAGTTCGAAAACTTGTTGATGACAGAAAATATCCCGAAGCTACAACAGCAGCTGAGAAATTGTCAGGAATCCCTTCTGAAGTATACCAACTTCTTGGTGATATTAAATTGGAGTTTGATGATGCTCATCTTAAATATTCGGAAGAGTCTTATCACAGGGAGCTTGATTTGGATACTGCAACAGCAAAAATAAAATACAATGTGGGTGATGTAGAATTTACCAGAGAGCATTTTTCTTCTTATCCAGACCAAGTGCTAGTGACAAAGTTTTCCACTAGCAAGTCAGGGTCATTATCATTTACAGTATCTTTGGATAGCAAATTACATCACAATTCACGGTTAAGCGGCCAAAATCAGATAATATTGGAAGGAAGTTGTCCTGTCAAAAGGATCGCGCCACATCTCAATTACGGTGGCGAACCAAAGGGAATTCAGTTTTGTGCAGTTCTTGATCTGCAGATTAGTAATGGCAAAGGAGTTATACATGCTTTGGATGATAAGAAGTTTAGAGTTGAAGGTGCAGACTGGGCTGTTTTGCTTCTGACAGCTTCCTCGTCTTTTGATGGTCCATTTACTAATCCTAAAGACTCTAAGAAGGATCCTACTTCCGAGTCCTTGAGTAAAATGAAGTCTGTGAAAAGCTTTTCATATGACAATATATATGCACGTCACTTGGACGATTATCAGCATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGTTCCAAGACTAATATCTCTCAATTGGGAGGTGATGGTACTGTTCCAACTTCATCAAGAGTCAAATCATTTCAAAAGGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTACTAATCGCTTGTTCACGTCCTGGAACTCAGGTGGCGAACCTACAGGGTATTTGGAATAAAGATGTTTCGCCTGCATGGGATGGGGCTCAGCACTTGAACATAAATCTTCAAATGAATTATTGGCCATCCCTTTCTTGTAACCTACGTGAGTGTCAAGAGCCATTATTTGATTACATTTCCTCTATGTCAGTCAATGGTAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGCACATCAGGTTTCTGACTTATGGGTTAAAACATCTCCAGATCGAGGTCAGGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTGCTATCCATCTATGGGAGCATTACACTTATACAATGGACAAAGAATTTCTAAAAAATAAAGCATATCCTTTGTTGGAAGGATGCACATCATTTTTGTTGGATTGGTTGATTGAAGGCCCTGGTGGACTATTGGAAACTAACCCATCAACTTCACCGGAGCACATGTTCATTGCACCAGATCAAAAGCAAGCTAGTGTGAGCTACTCATCAACCATGGATATTTCAATCATAAAAGAAATTTTCTCTATAATCATTTCTGCTGCTGAGGTTTTGGGAAGACATGATGATGCTATTATCAAAAGAGTAATTGCGTCTCAGTCTAGGCTTCCTCCTACAAAAATTGCTAGGGATGGATGCATTATGGAATGGGCTGAAGATTTTCAGGATCCAGAAGTACATCATCGACATGTTTCACATTTGTTTGGCTTGTTTCCTGGGCACACAATAGATCTTGAAAAAACTCCAGATCTCTGTAAAGCTGTTGATAATAGTTTAATTAAAAGAGGAGAAGACGGTCCTGGATGGTCATCAACTTGGAAAGCTGCATTGTGGGCTCATCTGCACAACAGTGAGCATGCATATCGCATGATAAAACATTTGATTATCTTGGTGGACCCTGAGCATGAGGCAGATTACGAAGGAGGACTTTACAGTAACCTGTTCACAGCACATCCTCCATTCCAAATTGATGCAAACTTTGGTTTTTCATCAGCAATTGCAGAAATGCTTGTTCAAAGCACAACAAAGGACCTCTTCTTACTTCCCGCGTTGCCTCGTGATAAATGGGCAAGTGGTTGTGTGAAAGGATTAAAAGCCCGTGGCGGGGTGACTGTTAACATCTGCTGGAAAGAAGGAAACCTGCATGAAGTTGGGCTTTGGTCACAAAACCAAAATTCCAAAATGAGACTACATTATAGAGGGAGCATGGTTGTGGCAAATTTAACACCAGGCAGAGTTTACTCATATAATAATGGCTTGAAGTGTGTTAAGACATACTCCTTTAACGAGGTTAATCCTTGA 2490 0.4124 MEDGDWVLVRAPSPKHLWKPSLPNADHLDDDESSRPLKVTFSSPAKYWTDAIPIGNGSLGAMVWGGVHTDVLQLNDTLWTGVPGNYTDKNAPEVLAEVRKLVDDRKYPEATTAAEKLSGIPSEVYQLLGDIKLEFDDAHLKYSEESYHRELDLDTATAKIKYNVGDVEFTREHFSSYPDQVLVTKFSTSKSGSLSFTVSLDSKLHHNSRLSGQNQIILEGSCPVKRIAPHLNYGGEPKGIQFCAVLDLQISNGKGVIHALDDKKFRVEGADWAVLLLTASSSFDGPFTNPKDSKKDPTSESLSKMKSVKSFSYDNIYARHLDDYQHLFHRVSLQLSKSSKTNISQLGGDGTVPTSSRVKSFQKDEDPSFVELLFQYGRYLLIACSRPGTQVANLQGIWNKDVSPAWDGAQHLNINLQMNYWPSLSCNLRECQEPLFDYISSMSVNGSKTAKVNYEANGWVAHQVSDLWVKTSPDRGQAVWALWPMGGAWLAIHLWEHYTYTMDKEFLKNKAYPLLEGCTSFLLDWLIEGPGGLLETNPSTSPEHMFIAPDQKQASVSYSSTMDISIIKEIFSIIISAAEVLGRHDDAIIKRVIASQSRLPPTKIARDGCIMEWAEDFQDPEVHHRHVSHLFGLFPGHTIDLEKTPDLCKAVDNSLIKRGEDGPGWSSTWKAALWAHLHNSEHAYRMIKHLIILVDPEHEADYEGGLYSNLFTAHPPFQIDANFGFSSAIAEMLVQSTTKDLFLLPALPRDKWASGCVKGLKARGGVTVNICWKEGNLHEVGLWSQNQNSKMRLHYRGSMVVANLTPGRVYSYNNGLKCVKTYSFNEVNP 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03895 829 PIRSF UCP007663 19 827 IPR016518 GO:0004560
Vivi1g03895 829 PANTHER ALPHA-L-FUCOSIDASE 2 20 822 - -
Vivi1g03895 829 Pfam Glycosyl hydrolase family 65, N-terminal domain 40 285 IPR027414 -
Vivi1g03895 829 Gene3D - 273 733 IPR012341 GO:0005975
Vivi1g03895 829 SUPERFAMILY Six-hairpin glycosidases 295 781 IPR008928 GO:0005975
Vivi1g03895 829 FunFam Alpha-L-fucosidase 2 270 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03895 Vivi-Chr1 82411182 82416945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03895 K15923 - gmx:100817294 1374.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03895 1 82411182 82416945 Vivi1g03895 1 82411182 82416945 ECH