Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03888 ATGCAAACTGTCTTCTTTTTCTCAGTACTCCTTGCAGTAACTCATGGAATACAAGCAGTTGAGTACACTGTAACCAACACCGCACTCTCTACACCTGGTGGTATGCGTTTCCGCGACTATATCGGAACACAATACACCAAACAAACACTAAACTCCGCCACACAATTCATATGGAAAATCTTCCAAGAGAACAACCCTGCTGACAGAAAAAACGTGCAGAAGGTGAGCTTATTTGTGGACGATATTGATGGAATTGCATTTACATATATAAGCACCAGCGAGATTCACGTTAGTGCAAGGTATCTTAATACGATTACCACCATAGATGAACTTACAGGAGTATTGTATCATGAAATGACACATGTTTGGCAGTGGAATGGAAATGGTCAAGCAAATGGTGGATTGATTGAAGGCATAGCAGACTATGTGAGGTTGAAAGCAAATTTTGCTCCAAGTCATTGGGTTAAAGATGGACAAGGTGATAAATGGGATCATGGCTATGATGTTACAGCTCGTTTTTTGGATTATTGTGATAGTTTAAGAAATGGATTTGTGGCAGACTTGAATAAGTTGATGAAGAGTGGTTATAGTGATGACTTCTTTGCTACGTTGTTGGGAAAGACGCCTGATCAGTTGTTTATGGACTATAAGAATCATTATGGTAATATACCCTAA 675 0.3926 MQTVFFFSVLLAVTHGIQAVEYTVTNTALSTPGGMRFRDYIGTQYTKQTLNSATQFIWKIFQENNPADRKNVQKVSLFVDDIDGIAFTYISTSEIHVSARYLNTITTIDELTGVLYHEMTHVWQWNGNGQANGGLIEGIADYVRLKANFAPSHWVKDGQGDKWDHGYDVTARFLDYCDSLRNGFVADLNKLMKSGYSDDFFATLLGKTPDQLFMDYKNHYGNIP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03888 224 Pfam Peptidase of plants and bacteria 19 216 IPR007541 -
Vivi1g03888 224 PANTHER - 5 219 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03888 Vivi-Chr1 82341412 82342123 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03888 - - gmx:100499938 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03888 1 82341412 82342123 Vivi1g03888 1 82341412 82342123 ECH