Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03792 ATGGCTCTTGCTCAAGCTCCACCCTCTGCTTCTCTCTCCGTCTCTCTTCGCGATGCTCGTGTTTTCGCCACAAGAAACTCTCCTTCAGCCTCTGCGAAGTTTCTTAAACCCAGTTTGTCTCCAGTTCGAGCATCCTTCGCCACTGGTTCCCCACTATTGATTCGGGGGAATCATGGAAGGAAGACAGTATACAGAGCAATGCCAGTTTCAATAAGATGTGAACAAAACACTAAGGATGGGAACGGTTTGGATGTATGGCTAGGCCGGGGAGCCATGATTGGTTTTGCAGTTGCCATTACTGTTGAAATTACTTCAGGAAAAGGACTCCTAGAGAACTTTGGTCTCACAAGTCCATTGCCTACAGTTGCCCTGGCCGTAACAGGACTGGTCGGTGTCTTGACCGCAGTTTTCATCTTCCAGTCAGCCTCAGAGAACTGA 438 0.4886 MALAQAPPSASLSVSLRDARVFATRNSPSASAKFLKPSLSPVRASFATGSPLLIRGNHGRKTVYRAMPVSIRCEQNTKDGNGLDVWLGRGAMIGFAVAITVEITSGKGLLENFGLTSPLPTVALAVTGLVGVLTAVFIFQSASEN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03792 145 PANTHER STRESS ENHANCED PROTEIN 2, CHLOROPLASTIC 27 144 IPR044971 GO:0071486
Vivi1g03792 145 SUPERFAMILY Chlorophyll a-b binding protein 84 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03792 Vivi-Chr1 80680635 80681754 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03792 - K07937 tpra:123902768 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03792 1 80680635 80681754 Vivi1g03792 1 80680635 80681754 ECH