Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03701 ATGGGTTTGGGAACCACCACTGTTCCTACGAACATTCTTCCTCAATTCGGGTTGCTCCGAACCCATTTAAACCCTATTCGGGTCAACAATTCTTCCGGGTTCAGCTACCCTCTCTCTCGAAGGAAGAATAAGAGTTTTGATAAACTCGTTTGCTTCGCCGTTGATGACGAAATCAGAGAGAAGCAACAACAACAGTTGAGTTCTAGTTCGAATAGACTTGGCTCCGCCATTGAAGAAAGACCAGATACGCTTGATGGTATAAGTGAAGATGCATTGGAAAATTTTAAGGATGATGGGGAAAGAAGTGCTATCTATGATTTTCTTTATCCTAGTAAAGAGCTTCTACCCGATGATAAAGAGATGAGCATATTCGATCACCTTGAAGAGCTACGAGAGAGAATCTTTATTTCAGTTCTTGGAGTCGGAGGAAGCATTTTGGGATGCTTTGCGTTTTCAAAAGATTTGGTAAAGATTCTCGAAGCTCCTGTTAAATCAGAGGGTGTCCGATTTCTTCAGCTAGCTCCCGGTGAATTTTTCTTCACCACTTTAAAGGTGTCGGGATATTGTGGCCTCCTCTTGGGAAGTCCCATCATTCTCTACGAAATCATAGCCTTTATAATTCCGGGACTAACGAAAGAAGAAAGAAAGTTTCTAGGACCGATTGTTTTAGGCTCATCAGTTCTTTTCTATGCCGGAATAACCTTCTCCTACTTAGTTCTAGTACCTGCGGCATTAAATTTCTTTGTCAATTACGCTGAAGGTGCTGTTGAATCACTGTGGTCCATCGATCAATACTTTGAGTTTGTTCTGGTTCTTATGTTCAGTACAGGGTTGTCTTTCCAGGTGCCTATTATACAACTTCTATTGGGACAACTTGGATTGGTATCTGGAGACAAGATGCTATCGGTTTGGAGGTATGTTGTAGTCGGCGCAGTTGTGGCAGCTGCTATAGTTACGCCATCCACAGATCCTCTCACCCAAGTTCTTCTTGCGGCGCCGTTATTAGGCCTCTACCTGGGTGGTGCATGGATGGTCAAACTCGCTGGACGATAA 1053 0.433 MGLGTTTVPTNILPQFGLLRTHLNPIRVNNSSGFSYPLSRRKNKSFDKLVCFAVDDEIREKQQQQLSSSSNRLGSAIEERPDTLDGISEDALENFKDDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03701 350 PRINTS Bacterial Sec-independent translocation TatC protein family signature 214 240 IPR002033 GO:0016020
Vivi1g03701 350 PRINTS Bacterial Sec-independent translocation TatC protein family signature 122 149 IPR002033 GO:0016020
Vivi1g03701 350 PRINTS Bacterial Sec-independent translocation TatC protein family signature 265 293 IPR002033 GO:0016020
Vivi1g03701 350 PRINTS Bacterial Sec-independent translocation TatC protein family signature 196 214 IPR002033 GO:0016020
Vivi1g03701 350 Hamap Sec-independent protein translocase protein TatC [tatC]. 118 350 IPR002033 GO:0016020
Vivi1g03701 350 Pfam Sec-independent protein translocase protein (TatC) 125 333 IPR002033 GO:0016020
Vivi1g03701 350 NCBIfam twin-arginine translocase subunit TatC 123 338 IPR002033 GO:0016020
Vivi1g03701 350 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 102 350 IPR002033 GO:0016020
Vivi1g03701 350 ProSitePatterns TatC family signature. 265 284 IPR019820 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03701 K03118 - gmx:100801670 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03701 1 79318125 79320608 Vivi1g03701 1 79318125 79320608 ECH